myRT

myRT report for GCA_000248355.2_ASM24835v2

Download annotations/find similar RTs

Seq: AIEL01000112.1 Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 strain NCTC 5866 contig_0112, whole genome shotgun sequence (2683 bp)
Overview 1 RT 1: 1-2069 bp Neighborhood of RT #1 [1, 2069] PHA02517 RVT-GII GIIM Feature: gene Location: 1-399 bp Feature: domain Description: PHA02517 Location: 28-397 bp Feature: domain Description: PHA0251 7 Location: 28-397 bp Feature: gene Location: 452-1693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650-1 307 bp Feature: domain Description: GIIM Note: maturase Location: 1385-1616 bp Feature: domain Description: GIIM Note: maturase Location: 1 385-1 61 6 bp Feature: gene Location: 1700-1864 bp Feature: gene Location: 1941-2069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AIEL01000003.1 Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 strain NCTC 5866 contig_0003, whole genome shotgun sequence (118606 bp)
Overview 1 RT 1: 68483-75571 bp Neighborhood of RT #1 [68483, 75573] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like RVT-UG5 PRK07209 Feature: gene Location: 68483-70909 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 68852-69347 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 68852 -69347 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 69647-70214 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 69647-702 14 bp Feature: gene Location: 70925-71239 bp Feature: gene Location: 71335-72378 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71455-71947 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71455-71947 bp Feature: gene Location: 72327-74165 bp Feature: gene Location: 74290-75573 bp Feature: domain Description: PRK07209 Location: 74302-75571 bp Feature: domain Description: PRK072 09 Location: 74302 -75571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), RVT-UG5, PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated)