myRT

myRT report for GCA_000249055.2_ASM24905v2

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Seq: AIEV01000030.1 Escherichia coli DEC1A gecDEC1A.contig.29_1, whole genome shotgun sequence (169229 bp)
Overview 1 RT 1: 146262-153769 bp Neighborhood of RT #1 [146262, 153954] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 146262-147362 bp Feature: gene Location: 147840-149666 bp Ori: EHU11131.1 Feature: domain Description: AAA_23 Location: 147894-148629 bp Feature: domain Description: AAA_23 Location: 1 47894-1 48629 bp Feature: domain Description: SMC_prok_A Location: 148872-149190 bp Feature: domain Description: SMC_prok_A Location: 1 48872-1 491 90 bp Feature: gene Location: 150717-151652 bp Ori: EHU11072.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150819-151419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5081 9-1 51 41 9 bp Feature: gene Location: 151649-153301 bp Ori: EHU11169.1 Feature: domain Description: COG3950 Location: 151847-153263 bp Feature: domain Description: COG3950 Location: 1 51 847-1 53263 bp Feature: gene Location: 153304-153954 bp Ori: EHU11122.1 Feature: domain Description: TIGR02646 Location: 153370-153769 bp Feature: domain Description: TIGR02646 Location: 1 53370-1 53769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AIEV01000051.1 Escherichia coli DEC1A gecDEC1A.contig.50_1, whole genome shotgun sequence (37175 bp)
Overview 1 RT 1: 12995-16790 bp Neighborhood of RT #1 [12995, 16795] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 12995-13450 bp Ori: EHU04545.1 Feature: domain Description: dut Location: 12998-13445 bp Feature: domain Description: dut Location: 12 998-13445 bp Feature: gene Location: 13557-14153 bp Ori: EHU04498.1 Gene: ttk Feature: domain Description: slmA Location: 13563-14139 bp Feature: domain Description: slmA Location: 13563-14139 bp Feature: gene Location: 14197-15156 bp Ori: EHU04528.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14332-14881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14332 -14881 bp Feature: gene Location: 15453-16094 bp Ori: EHU04506.1 Gene: pyrE Feature: domain Description: pyrE Location: 15456-16089 bp Feature: domain Description: pyrE Location: 15456-16089 bp Feature: gene Location: 16160-16795 bp Ori: EHU04507.1 Gene: rph Feature: domain Description: rph Location: 16163-16790 bp Feature: domain Description: rph Location: 16163-16790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)