myRT

myRT report for GCA_000249075.2_ASM24907v2

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Seq: AIEW01000058.1 Escherichia coli DEC1B gecDEC1B.contig.57_1, whole genome shotgun sequence (201936 bp)
Overview 1 RT 1: 147623-151417 bp Neighborhood of RT #1 [147623, 151422] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 147623-148078 bp Ori: EHU07911.1 Feature: domain Description: dut Location: 147626-148073 bp Feature: domain Description: dut Location: 1 47626-1 48073 bp Feature: gene Location: 148185-148781 bp Ori: EHU07912.1 Gene: ttk Feature: domain Description: slmA Location: 148191-148767 bp Feature: domain Description: slmA Location: 1 481 91 -1 48767 bp Feature: gene Location: 148825-149784 bp Ori: EHU07913.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148960-149509 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 48960-1 49509 bp Feature: gene Location: 150081-150722 bp Ori: EHU07914.1 Gene: pyrE Feature: domain Description: pyrE Location: 150084-150717 bp Feature: domain Description: pyrE Location: 1 50084-1 5071 7 bp Feature: gene Location: 150787-151422 bp Ori: EHU07915.1 Gene: rph Feature: domain Description: rph Location: 150790-151417 bp Feature: domain Description: rph Location: 1 50790-1 51 41 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: AIEW01000027.1 Escherichia coli DEC1B gecDEC1B.contig.26_1, whole genome shotgun sequence (126246 bp)
Overview 1 RT 1: 106745-112673 bp Neighborhood of RT #1 [106745, 112858] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 106745-108139 bp Ori: EHU15676.1 Feature: domain Description: AAA_23 Location: 106799-107534 bp Feature: domain Description: AAA_2 3 Location: 106799-107534 bp Feature: domain Description: SMC_prok_A Location: 107777-108128 bp Feature: domain Description: SMC_prok_A Location: 107777-10812 8 bp Feature: gene Location: 108412-108570 bp Feature: gene Location: 109621-110556 bp Ori: EHU15678.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109723-110323 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10972 3-11032 3 bp Feature: gene Location: 110553-112205 bp Ori: EHU15679.1 Feature: domain Description: COG3950 Location: 110751-112167 bp Feature: domain Description: COG3950 Location: 110751-112 167 bp Feature: gene Location: 112208-112858 bp Ori: EHU15680.1 Feature: domain Description: TIGR02646 Location: 112274-112673 bp Feature: domain Description: TIGR02 646 Location: 112 2 74-112 673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)