myRT

myRT report for GCA_000249095.2_ASM24909v2

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Seq: AIEX01000032.1 Escherichia coli DEC1C gecDEC1C.contig.31_1, whole genome shotgun sequence (236830 bp)
Overview 1 RT 1: 215708-221636 bp Neighborhood of RT #1 [215708, 221821] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 215708-217102 bp Ori: EHU13402.1 Feature: domain Description: AAA_23 Location: 215762-216497 bp Feature: domain Description: AAA_23 Location: 21 5762-21 6497 bp Feature: domain Description: SMC_prok_A Location: 216740-217091 bp Feature: domain Description: SMC_prok_A Location: 21 6740-21 7091 bp Feature: gene Location: 217375-217533 bp Feature: gene Location: 218584-219519 bp Ori: EHU13404.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 218686-219286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 8686-21 9286 bp Feature: gene Location: 219516-221168 bp Ori: EHU13405.1 Feature: domain Description: COG3950 Location: 219714-221130 bp Feature: domain Description: COG3950 Location: 21 971 4-221 1 30 bp Feature: gene Location: 221171-221821 bp Ori: EHU13406.1 Feature: domain Description: TIGR02646 Location: 221237-221636 bp Feature: domain Description: TIGR02646 Location: 221 237-221 636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AIEX01000063.1 Escherichia coli DEC1C gecDEC1C.contig.62_1, whole genome shotgun sequence (210041 bp)
Overview 1 RT 1: 149632-153508 bp Neighborhood of RT #1 [149632, 153513] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 149632-150087 bp Ori: EHU04796.1 Feature: domain Description: dut Location: 149635-150082 bp Feature: domain Description: dut Location: 149635-150082 bp Feature: gene Location: 150194-150790 bp Ori: EHU04797.1 Gene: ttk Feature: domain Description: slmA Location: 150200-150776 bp Feature: domain Description: slmA Location: 1502 00-150776 bp Feature: gene Location: 150834-151793 bp Ori: EHU04798.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150969-151518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150969-151518 bp Feature: gene Location: 152090-152731 bp Ori: EHU04799.1 Gene: pyrE Feature: domain Description: pyrE Location: 152093-152726 bp Feature: domain Description: pyrE Location: 152 093-152 72 6 bp Feature: gene Location: 152797-153513 bp Ori: EHU04800.1 Gene: rph Feature: domain Description: rph Location: 152800-153508 bp Feature: domain Description: rph Location: 152 800-153508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)