myRT

myRT report for GCA_000249115.2_ASM24911v2

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Seq: AIEY01000038.1 Escherichia coli DEC1D gecDEC1D.contig.38_1, whole genome shotgun sequence (103170 bp)
Overview 1 RT 1: 89862-95791 bp Neighborhood of RT #1 [89862, 95976] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 89862-91256 bp Ori: EHU24591.1 Feature: domain Description: AAA_23 Location: 89916-90651 bp Feature: domain Description: AAA_23 Location: 8991 6-90651 bp Feature: domain Description: SMC_prok_A Location: 90894-91245 bp Feature: domain Description: SMC_prok_A Location: 90894-91 245 bp Feature: gene Location: 91529-91687 bp Feature: gene Location: 92739-93674 bp Ori: EHU24593.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 92841-93441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 92841 -93441 bp Feature: gene Location: 93671-95323 bp Ori: EHU24594.1 Feature: domain Description: COG3950 Location: 93869-95285 bp Feature: domain Description: COG3950 Location: 93869-95285 bp Feature: gene Location: 95326-95976 bp Ori: EHU24595.1 Feature: domain Description: TIGR02646 Location: 95392-95791 bp Feature: domain Description: TIGR02646 Location: 95392-95791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AIEY01000060.1 Escherichia coli DEC1D gecDEC1D.contig.60_1, whole genome shotgun sequence (165055 bp)
Overview 1 RT 1: 116484-120360 bp Neighborhood of RT #1 [116484, 120365] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 116484-116939 bp Ori: EHU18230.1 Gene: dut Feature: domain Description: dut Location: 116487-116934 bp Feature: domain Description: dut Location: 116487-116934 bp Feature: gene Location: 117046-117642 bp Ori: EHU18231.1 Gene: slmA Feature: domain Description: slmA Location: 117052-117628 bp Feature: domain Description: slmA Location: 117052 -11762 8 bp Feature: gene Location: 117686-118645 bp Ori: EHU18232.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117821-118370 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11782 1-118370 bp Feature: gene Location: 118942-119583 bp Ori: EHU18233.1 Gene: pyrE Feature: domain Description: pyrE Location: 118945-119578 bp Feature: domain Description: pyrE Location: 118945-119578 bp Feature: gene Location: 119649-120365 bp Ori: EHU18234.1 Gene: rph Feature: domain Description: rph Location: 119652-120360 bp Feature: domain Description: rph Location: 119652 -12 0360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)