myRT

myRT report for GCA_000249135.2_ASM24913v2

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Seq: AIEZ01000032.1 Escherichia coli DEC1E gecDEC1E.contig.31_1, whole genome shotgun sequence (366629 bp)
Overview 1 RT 1: 172804-176599 bp Neighborhood of RT #1 [172804, 176604] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 172804-173259 bp Ori: EHU21504.1 Feature: domain Description: dut Location: 172807-173254 bp Feature: domain Description: dut Location: 1 72807-1 73254 bp Feature: gene Location: 173366-173962 bp Ori: EHU21505.1 Gene: ttk Feature: domain Description: slmA Location: 173372-173948 bp Feature: domain Description: slmA Location: 1 73372-1 73948 bp Feature: gene Location: 174006-174965 bp Ori: EHU21506.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174141-174690 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 741 41 -1 74690 bp Feature: gene Location: 175262-175903 bp Ori: EHU21507.1 Gene: pyrE Feature: domain Description: pyrE Location: 175265-175898 bp Feature: domain Description: pyrE Location: 1 75265-1 75898 bp Feature: gene Location: 175969-176604 bp Ori: EHU21508.1 Gene: rph Feature: domain Description: rph Location: 175972-176599 bp Feature: domain Description: rph Location: 1 75972-1 76599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: AIEZ01000014.1 Escherichia coli DEC1E gecDEC1E.contig.13_1, whole genome shotgun sequence (31372 bp)
Overview 1 RT 1: 16787-22716 bp Neighborhood of RT #1 [16787, 22901] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 16787-18181 bp Ori: EHU28627.1 Feature: domain Description: AAA_23 Location: 16841-17576 bp Feature: domain Description: AAA_2 3 Location: 16841-17576 bp Feature: domain Description: SMC_prok_A Location: 17819-18170 bp Feature: domain Description: SMC_prok_A Location: 17819-18170 bp Feature: gene Location: 18939-19241 bp Feature: gene Location: 19664-20599 bp Ori: EHU28629.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19766-20366 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19766-2 0366 bp Feature: gene Location: 20596-22248 bp Ori: EHU28630.1 Feature: domain Description: COG3950 Location: 20794-22210 bp Feature: domain Description: COG3950 Location: 2 0794-2 2 2 10 bp Feature: gene Location: 22251-22901 bp Ori: EHU28631.1 Feature: domain Description: TIGR02646 Location: 22317-22716 bp Feature: domain Description: TIGR02 646 Location: 2 2 317-2 2 716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)