myRT

myRT report for GCA_000249155.2_ASM24915v2

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Seq: AIFA01000047.1 Escherichia coli DEC2A gecDEC2A.contig.46_1, whole genome shotgun sequence (439211 bp)
Overview 1 RT 1: 5560-8105 bp Neighborhood of RT #1 [5560, 8143] RVT-Retrons COG3950 Feature: gene Location: 5560-5979 bp Ori: EHU30092.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5662-5908 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5662-5908 bp Feature: gene Location: 6264-6494 bp Feature: gene Location: 6491-8143 bp Ori: EHU30094.1 Feature: domain Description: COG3950 Location: 6689-8105 bp Feature: domain Description: COG3950 Location: 6689-81 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: AIFA01000063.1 Escherichia coli DEC2A gecDEC2A.contig.62_1, whole genome shotgun sequence (56633 bp)
Overview 1 RT 1: 9618-13494 bp Neighborhood of RT #1 [9618, 13499] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9618-10073 bp Ori: EHU23995.1 Gene: dut Feature: domain Description: dut Location: 9621-10068 bp Feature: domain Description: dut Location: 962 1-10068 bp Feature: gene Location: 10180-10776 bp Ori: EHU23996.1 Gene: slmA Feature: domain Description: slmA Location: 10186-10762 bp Feature: domain Description: slmA Location: 10186-10762 bp Feature: gene Location: 10820-11779 bp Ori: EHU23997.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10955-11504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10955-11504 bp Feature: gene Location: 12076-12717 bp Ori: EHU23998.1 Gene: pyrE Feature: domain Description: pyrE Location: 12079-12712 bp Feature: domain Description: pyrE Location: 12 079-12 712 bp Feature: gene Location: 12783-13499 bp Ori: EHU23999.1 Gene: rph Feature: domain Description: rph Location: 12786-13494 bp Feature: domain Description: rph Location: 12 786-13494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)