myRT

myRT report for GCA_000249175.2_ASM24917v2

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Seq: AFJB01000010.1 Escherichia coli DEC2B gecDEC2B.contig.9_1, whole genome shotgun sequence (108753 bp)
Overview 1 RT 1: 87742-93670 bp Neighborhood of RT #1 [87742, 93855] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 87742-89136 bp Ori: EHU41156.1 Feature: domain Description: AAA_23 Location: 87796-88531 bp Feature: domain Description: AAA_23 Location: 87796-88531 bp Feature: domain Description: SMC_prok_A Location: 88774-89125 bp Feature: domain Description: SMC_prok_A Location: 88774-891 25 bp Feature: gene Location: 89409-89567 bp Feature: gene Location: 90618-91553 bp Ori: EHU41158.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90720-91320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90720-91 320 bp Feature: gene Location: 91550-93202 bp Ori: EHU41159.1 Feature: domain Description: COG3950 Location: 91748-93164 bp Feature: domain Description: COG3950 Location: 91 748-931 64 bp Feature: gene Location: 93205-93855 bp Ori: EHU41160.1 Feature: domain Description: TIGR02646 Location: 93271-93670 bp Feature: domain Description: TIGR02646 Location: 93271 -93670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AFJB01000032.1 Escherichia coli DEC2B gecDEC2B.contig.31_1, whole genome shotgun sequence (201043 bp)
Overview 1 RT 1: 149590-153466 bp Neighborhood of RT #1 [149590, 153471] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 149590-150045 bp Ori: EHU35600.1 Feature: domain Description: dut Location: 149593-150040 bp Feature: domain Description: dut Location: 149593-150040 bp Feature: gene Location: 150152-150748 bp Ori: EHU35601.1 Gene: ttk Feature: domain Description: slmA Location: 150158-150734 bp Feature: domain Description: slmA Location: 150158-150734 bp Feature: gene Location: 150792-151751 bp Ori: EHU35602.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150927-151476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15092 7-151476 bp Feature: gene Location: 152048-152689 bp Ori: EHU35603.1 Gene: pyrE Feature: domain Description: pyrE Location: 152051-152684 bp Feature: domain Description: pyrE Location: 152 051-152 684 bp Feature: gene Location: 152755-153471 bp Ori: EHU35604.1 Gene: rph Feature: domain Description: rph Location: 152758-153466 bp Feature: domain Description: rph Location: 152 758-153466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)