myRT

myRT report for GCA_000249195.2_ASM24919v2

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Seq: AIFB01000027.1 Escherichia coli DEC2C gecDEC2C.contig.26_1, whole genome shotgun sequence (108931 bp)
Overview 1 RT 1: 86227-93734 bp Neighborhood of RT #1 [86227, 93919] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 86227-87327 bp Feature: gene Location: 87805-89631 bp Ori: EHU46005.1 Feature: domain Description: AAA_23 Location: 87859-88594 bp Feature: domain Description: AAA_23 Location: 87859-88594 bp Feature: domain Description: SMC_prok_A Location: 88837-89155 bp Feature: domain Description: SMC_prok_A Location: 88837-891 55 bp Feature: gene Location: 90682-91617 bp Ori: EHU46006.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90784-91384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90784-91 384 bp Feature: gene Location: 91614-93266 bp Ori: EHU46007.1 Feature: domain Description: COG3950 Location: 91812-93228 bp Feature: domain Description: COG3950 Location: 91 81 2-93228 bp Feature: gene Location: 93269-93919 bp Ori: EHU46008.1 Feature: domain Description: TIGR02646 Location: 93335-93734 bp Feature: domain Description: TIGR02646 Location: 93335-93734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AIFB01000061.1 Escherichia coli DEC2C gecDEC2C.contig.60_1, whole genome shotgun sequence (209795 bp)
Overview 1 RT 1: 149571-153446 bp Neighborhood of RT #1 [149571, 153451] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 149571-150026 bp Ori: EHU37900.1 Feature: domain Description: dut Location: 149574-150021 bp Feature: domain Description: dut Location: 149574-15002 1 bp Feature: gene Location: 150133-150729 bp Ori: EHU37901.1 Gene: ttk Feature: domain Description: slmA Location: 150139-150715 bp Feature: domain Description: slmA Location: 150139-150715 bp Feature: gene Location: 150773-151732 bp Ori: EHU37902.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150908-151457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150908-151457 bp Feature: gene Location: 152029-152670 bp Ori: EHU37903.1 Gene: pyrE Feature: domain Description: pyrE Location: 152032-152665 bp Feature: domain Description: pyrE Location: 152 032 -152 665 bp Feature: gene Location: 152735-153451 bp Ori: EHU37904.1 Gene: rph Feature: domain Description: rph Location: 152738-153446 bp Feature: domain Description: rph Location: 152 738-153446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)