myRT

myRT report for GCA_000249215.2_ASM24921v2

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Seq: AIFC01000017.1 Escherichia coli DEC2D gecDEC2D.contig.16_1, whole genome shotgun sequence (169292 bp)
Overview 1 RT 1: 148126-154054 bp Neighborhood of RT #1 [148126, 154239] AAA_23 SMC_prok_A RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 148126-149520 bp Ori: EHU46667.1 Feature: domain Description: AAA_23 Location: 148180-148915 bp Feature: domain Description: AAA_23 Location: 1 481 80-1 4891 5 bp Feature: domain Description: SMC_prok_A Location: 149158-149509 bp Feature: domain Description: SMC_prok_A Location: 1 491 58-1 49509 bp Feature: gene Location: 149793-149951 bp Feature: gene Location: 151002-151937 bp Ori: EHU46729.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 151104-151704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 51 1 04-1 51 704 bp Feature: gene Location: 151934-153586 bp Ori: EHU46696.1 Feature: domain Description: COG3950 Location: 152132-153548 bp Feature: domain Description: COG3950 Location: 1 521 32-1 53548 bp Feature: gene Location: 153589-154239 bp Ori: EHU46679.1 Feature: domain Description: TIGR02646 Location: 153655-154054 bp Feature: domain Description: TIGR02646 Location: 1 53655-1 54054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: AIFC01000037.1 Escherichia coli DEC2D gecDEC2D.contig.36_1, whole genome shotgun sequence (89156 bp)
Overview 1 RT 1: 12240-16116 bp Neighborhood of RT #1 [12240, 16121] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 12240-12695 bp Ori: EHU39712.1 Feature: domain Description: dut Location: 12243-12690 bp Feature: domain Description: dut Location: 12 2 43-12 690 bp Feature: gene Location: 12802-13398 bp Ori: EHU39716.1 Gene: ttk Feature: domain Description: slmA Location: 12808-13384 bp Feature: domain Description: slmA Location: 12 808-13384 bp Feature: gene Location: 13442-14401 bp Ori: EHU39646.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13577-14126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13577-1412 6 bp Feature: gene Location: 14698-15339 bp Ori: EHU39666.1 Gene: pyrE Feature: domain Description: pyrE Location: 14701-15334 bp Feature: domain Description: pyrE Location: 14701-15334 bp Feature: gene Location: 15405-16121 bp Ori: EHU39682.1 Gene: rph Feature: domain Description: rph Location: 15408-16116 bp Feature: domain Description: rph Location: 15408-16116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)