myRT

myRT report for GCA_000249615.2_ASM24961v2

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Seq: AIFW01000005.1 Escherichia coli DEC6B gecDEC6B.contig.4_1, whole genome shotgun sequence (16373 bp)
Overview 1 RT 1: 13827-16178 bp Neighborhood of RT #1 [13827, 16373] InsE PHA02517 RVT-GII Feature: gene Location: 13827-14102 bp Ori: EHV63943.1 Feature: domain Description: InsE Location: 13869-14100 bp Feature: domain Description: InsE Location: 1 3869-1 41 00 bp Feature: gene Location: 14102-14581 bp Ori: EHV63932.1 Feature: domain Description: PHA02517 Location: 14162-14516 bp Feature: domain Description: PHA0251 7 Location: 1 41 62-1 451 6 bp Feature: gene Location: 15188-16373 bp Ori: EHV63938.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15446-16178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5446-1 61 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AIFW01000050.1 Escherichia coli DEC6B gecDEC6B.contig.49_1, whole genome shotgun sequence (81984 bp)
Overview 1 RT 1: 1341-4748 bp 2 RT 2: 51222-56031 bp Neighborhood of RT #1 [1341, 4748] PHA02517 RVT-GII GIIM Neighborhood of RT #2 [51222, 56048] InsE PHA02517 RVT-GII GIIM PHA02517 Tra5 Feature: gene Location: 1341-1460 bp Feature: gene Location: 1513-1725 bp Ori: EHV49598.1 Feature: domain Description: PHA02517 Location: 1516-1660 bp Feature: domain Description: PHA02 517 Location: 1516-1660 bp Feature: gene Location: 2332-3840 bp Ori: EHV49606.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2590-3322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 590-332 2 bp Feature: domain Description: GIIM Note: maturase Location: 3397-3595 bp Feature: domain Description: GIIM Note: maturase Location: 3397-3595 bp Feature: gene Location: 4035-4169 bp Feature: gene Location: 4491-4748 bp Feature: gene Location: 51222-51548 bp Ori: EHV49548.1 Feature: domain Description: InsE Location: 51225-51546 bp Feature: domain Description: InsE Location: 512 2 5-51546 bp Feature: gene Location: 51548-52027 bp Ori: EHV49597.1 Feature: domain Description: PHA02517 Location: 51608-51962 bp Feature: domain Description: PHA02 517 Location: 51608-51962 bp Feature: gene Location: 52634-54142 bp Ori: EHV49602.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52892-53624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 892 -5362 4 bp Feature: domain Description: GIIM Note: maturase Location: 53699-53897 bp Feature: domain Description: GIIM Note: maturase Location: 53699-53897 bp Feature: gene Location: 54319-54705 bp Ori: EHV49578.1 Feature: domain Description: PHA02517 Location: 54322-54703 bp Feature: domain Description: PHA02 517 Location: 5432 2 -54703 bp Feature: gene Location: 55131-56048 bp Ori: EHV49617.1 Feature: domain Description: Tra5 Location: 55287-56031 bp Feature: domain Description: Tra5 Location: 552 87-56031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Tra5 (COG2801)

Seq: AIFW01000017.1 Escherichia coli DEC6B gecDEC6B.contig.16_1, whole genome shotgun sequence (264935 bp)
Overview 1 RT 1: 263187-264929 bp Neighborhood of RT #1 [263187, 264935] InsE PHA02517 RVT-GII Feature: gene Location: 263187-263513 bp Ori: EHV60966.1 Feature: domain Description: InsE Location: 263190-263511 bp Feature: domain Description: InsE Location: 263 190-263 511 bp Feature: gene Location: 263513-263992 bp Ori: EHV61070.1 Feature: domain Description: PHA02517 Location: 263573-263927 bp Feature: domain Description: PHA02517 Location: 263 573 -263 927 bp Feature: gene Location: 264599-264935 bp Ori: EHV61178.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264857-264929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264857-264929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AIFW01000037.1 Escherichia coli DEC6B gecDEC6B.contig.36_1, whole genome shotgun sequence (562159 bp)
Overview 1 RT 1: 456186-460152 bp Neighborhood of RT #1 [456186, 460152] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 456186-456512 bp Ori: EHV55259.1 Feature: domain Description: InsE Location: 456189-456510 bp Feature: domain Description: InsE Location: 4 56189-4 56510 bp Feature: gene Location: 456512-456991 bp Ori: EHV55649.1 Feature: domain Description: PHA02517 Location: 456572-456926 bp Feature: domain Description: PHA02517 Location: 4 56572-4 56926 bp Feature: gene Location: 457598-459106 bp Ori: EHV55584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457856-458588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 57856-4 58588 bp Feature: domain Description: GIIM Note: maturase Location: 458663-458861 bp Feature: domain Description: GIIM Note: maturase Location: 4 58663-4 58861 bp Feature: gene Location: 459283-459669 bp Ori: EHV55245.1 Feature: domain Description: PHA02517 Location: 459286-459667 bp Feature: domain Description: PHA02517 Location: 4 59286-4 59667 bp Feature: gene Location: 459709-460152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AIFW01000012.1 Escherichia coli DEC6B gecDEC6B.contig.11_1, whole genome shotgun sequence (15530 bp)
Overview 1 RT 1: 1-1928 bp Neighborhood of RT #1 [1, 1930] RVT-GII PHA02517 InsE Feature: gene Location: 1-518 bp Ori: EHV62524.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 9-445 bp Feature: gene Location: 1125-1604 bp Ori: EHV62532.1 Feature: domain Description: PHA02517 Location: 1185-1539 bp Feature: domain Description: PHA025 17 Location: 1185 -15 39 bp Feature: gene Location: 1604-1930 bp Ori: EHV62523.1 Feature: domain Description: InsE Location: 1607-1928 bp Feature: domain Description: InsE Location: 1607-1928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: AIFW01000027.1 Escherichia coli DEC6B gecDEC6B.contig.26_1, whole genome shotgun sequence (76191 bp)
Overview 1 RT 1: 1-2571 bp Neighborhood of RT #1 [1, 2744] RVT-GII GIIM PHA02517 Baseplate_J Feature: gene Location: 1-732 bp Ori: EHV57938.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-214 bp Feature: domain Description: GIIM Note: maturase Location: 289-508 bp Feature: domain Description: GIIM Note: maturase Location: 289-508 bp Feature: gene Location: 909-1295 bp Ori: EHV57896.1 Feature: domain Description: PHA02517 Location: 912-1293 bp Feature: domain Description: PHA02517 Location: 912-1293 bp Feature: gene Location: 1551-2744 bp Ori: EHV57966.1 Feature: domain Description: Baseplate_J Location: 1818-2571 bp Feature: domain Description: Baseplate_J Location: 1818-2571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Baseplate_J (pfam04865)

Seq: AIFW01000039.1 Escherichia coli DEC6B gecDEC6B.contig.38_1, whole genome shotgun sequence (142033 bp)
Overview 1 RT 1: 138690-141996 bp Neighborhood of RT #1 [138690, 142033] HTH_38 Tra8 PHA02517 RVT-GII RVT-GII Feature: gene Location: 138690-139841 bp Ori: EHV54185.1 Feature: domain Description: HTH_38 Location: 138699-138813 bp Feature: domain Description: HTH_38 Location: 138699-138813 bp Feature: domain Description: Tra8 Location: 138849-139830 bp Feature: domain Description: Tra8 Location: 138849-139830 bp Feature: gene Location: 140185-140397 bp Ori: EHV54139.1 Feature: domain Description: PHA02517 Location: 140188-140332 bp Feature: domain Description: PHA02517 Location: 140188-140332 bp Feature: gene Location: 141004-141927 bp Ori: EHV54172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141262-141718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141262-1417 18 bp Feature: gene Location: 141909-142033 bp Ori: EHV54120.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141918-141996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141918-141996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AIFW01000002.1 Escherichia coli DEC6B gecDEC6B.contig.1_1, whole genome shotgun sequence (117811 bp)
Overview 1 RT 1: 96265-101872 bp Neighborhood of RT #1 [96265, 101886] DD_cGKI COG3436 DDE_Tnp_IS66 RVT-GII GIIM GT4_PimA-like IS5 Feature: gene Location: 96265-96897 bp Ori: EHV65024.1 Feature: domain Description: DD_cGKI Location: 96304-96409 bp Feature: domain Description: DD_cGKI Location: 96304-96409 bp Feature: domain Description: COG3436 Location: 96538-96877 bp Feature: domain Description: COG3436 Location: 96538 -968 77 bp Feature: gene Location: 96982-97701 bp Ori: EHV65083.1 Feature: domain Description: DDE_Tnp_IS66 Location: 96991-97561 bp Feature: domain Description: DDE_Tnp_IS66 Location: 96991-97561 bp Feature: gene Location: 98100-99227 bp Ori: EHV65138.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98196-98850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98 196-98 8 50 bp Feature: domain Description: GIIM Note: maturase Location: 98928-99153 bp Feature: domain Description: GIIM Note: maturase Location: 98 928 -99153 bp Feature: gene Location: 99720-100400 bp Ori: EHV65062.1 Feature: domain Description: GT4_PimA-like Location: 99927-100395 bp Feature: domain Description: GT4_PimA-like Location: 99927-100395 bp Feature: gene Location: 100906-101886 bp Ori: EHV65111.1 Feature: domain Description: IS5 Location: 101095-101872 bp Feature: domain Description: IS5 Location: 101095-1018 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DD_cGKI (cl17044), COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), GT4_PimA-like (cd03801), IS5 (COG3039)

Seq: AIFW01000055.1 Escherichia coli DEC6B gecDEC6B.contig.55_1, whole genome shotgun sequence (1079 bp)
Overview 1 RT 1: 276-1027 bp Neighborhood of RT #1 [276, 1079] YkfC RVT-GII Feature: gene Location: 276-437 bp Ori: EHV49292.1 Feature: domain Description: YkfC Location: 285-423 bp Feature: domain Description: YkfC Location: 285-423 bp Feature: gene Location: 619-1079 bp Ori: EHV49293.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII