myRT

myRT report for GCA_000249715.2_ASM24971v2

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Seq: AIGB01000100.1 Escherichia coli DEC7B gecDEC7B.contig.101_1, whole genome shotgun sequence (1168 bp)
Overview 1 RT 1: 1-1164 bp Neighborhood of RT #1 [1, 1168] pyrE RVT-Retrons Feature: gene Location: 1-231 bp Ori: EHV83398.1 Feature: domain Description: pyrE Location: 4-211 bp Feature: domain Description: pyrE Location: 4-21 1 bp Feature: gene Location: 636-1168 bp Ori: EHV83399.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 771-1164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 771 -1 1 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrE (TIGR00336), RVT-Retrons

Seq: AIGB01000021.1 Escherichia coli DEC7B gecDEC7B.contig.20_1, whole genome shotgun sequence (4937 bp)
Overview 1 RT 1: 153-1431 bp Neighborhood of RT #1 [153, 1451] RVT-GII RVT-GII InsE Feature: gene Location: 153-347 bp Ori: EHV96385.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-300 bp Feature: gene Location: 394-699 bp Ori: EHV96392.1 Gene: pXO1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-682 bp Feature: gene Location: 761-886 bp Feature: gene Location: 1095-1451 bp Ori: EHV96390.1 Feature: domain Description: InsE Location: 1098-1431 bp Feature: domain Description: InsE Location: 1098-1431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)

Seq: AIGB01000138.1 Escherichia coli DEC7B gecDEC7B.contig.139_1, whole genome shotgun sequence (9901 bp)
Overview 1 RT 1: 535-3175 bp Neighborhood of RT #1 [535, 3175] RVT-GII GIIM PHA02517 Feature: gene Location: 535-1368 bp Ori: EHV81855.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-850 bp Feature: domain Description: GIIM Note: maturase Location: 925-1144 bp Feature: domain Description: GIIM Note: maturase Location: 925-1144 bp Feature: gene Location: 1485-1931 bp Ori: EHV81853.1 Feature: domain Description: PHA02517 Location: 1488-1929 bp Feature: domain Description: PHA02517 Location: 1488-1929 bp Feature: gene Location: 2402-3175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)