myRT

myRT report for GCA_000249775.2_ASM24977v2

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Seq: AIGE01000024.1 Escherichia coli DEC7E gecDEC7E.contig.23_1, whole genome shotgun sequence (170195 bp)
Overview 1 RT 1: 126003-129109 bp Neighborhood of RT #1 [126003, 129109] PRK10724 SmpB RVT-UG11 Feature: gene Location: 126003-126440 bp Ori: EHW00542.1 Gene: yfjG Feature: domain Description: PRK10724 Location: 126006-126438 bp Feature: domain Description: PRK1 0724 Location: 1 26006-1 26438 bp Feature: gene Location: 126611-127093 bp Ori: EHW00543.1 Gene: smpB Feature: domain Description: SmpB Location: 126641-127088 bp Feature: domain Description: SmpB Location: 1 26641 -1 27088 bp Feature: gene Location: 127779-128552 bp Ori: EHW00544.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 127914-128367 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 2791 4-1 28367 bp Feature: gene Location: 128521-128694 bp Feature: gene Location: 128927-129109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11

Seq: AIGE01000037.1 Escherichia coli DEC7E gecDEC7E.contig.36_1, whole genome shotgun sequence (291443 bp)
Overview 1 RT 1: 145254-149133 bp Neighborhood of RT #1 [145254, 149138] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 145254-145709 bp Ori: EHV97047.1 Gene: dut Feature: domain Description: dut Location: 145257-145704 bp Feature: domain Description: dut Location: 1452 57-145704 bp Feature: gene Location: 145816-146412 bp Ori: EHV97048.1 Gene: slmA Feature: domain Description: slmA Location: 145822-146398 bp Feature: domain Description: slmA Location: 14582 2 -146398 bp Feature: gene Location: 146458-147417 bp Ori: EHV97049.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 146593-147142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 146593-147142 bp Feature: gene Location: 147715-148356 bp Ori: EHV97050.1 Gene: pyrE Feature: domain Description: pyrE Location: 147718-148351 bp Feature: domain Description: pyrE Location: 147718-148351 bp Feature: gene Location: 148422-149138 bp Ori: EHV97051.1 Gene: rph Feature: domain Description: rph Location: 148425-149133 bp Feature: domain Description: rph Location: 14842 5-149133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)