myRT

myRT report for GCA_000250495.2_ASM25049v2

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Seq: AIHO01000036.1 Escherichia coli DEC15A gecDEC15A.contig.36_1, whole genome shotgun sequence (222905 bp)
Overview 1 RT 1: 204871-210144 bp Neighborhood of RT #1 [204871, 210144] RVT-Retrons PRK13889 Feature: gene Location: 204871-205422 bp Feature: gene Location: 206162-206377 bp Feature: gene Location: 206742-207842 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206883-207435 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206883-207435 bp Feature: gene Location: 207919-209421 bp Feature: domain Description: PRK13889 Location: 207922-208501 bp Feature: domain Description: PRK1 3889 Location: 207922-208501 bp Feature: gene Location: 210025-210144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: AIHO01000021.1 Escherichia coli DEC15A gecDEC15A.contig.21_1, whole genome shotgun sequence (37030 bp)
Overview 1 RT 1: 17999-23366 bp Neighborhood of RT #1 [17999, 23371] lnt PRK09413 RVT-GII PinE Feature: gene Location: 17999-19210 bp Feature: domain Description: lnt Location: 18353-19028 bp Feature: domain Description: lnt Location: 18353-1902 8 bp Feature: gene Location: 20105-20302 bp Feature: domain Description: PRK09413 Location: 20108-20270 bp Feature: domain Description: PRK09413 Location: 2 0108-2 02 70 bp Feature: gene Location: 20778-21638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21099-21630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1099-2 1630 bp Feature: gene Location: 22313-22714 bp Feature: gene Location: 22814-23371 bp Feature: domain Description: PinE Location: 22817-23366 bp Feature: domain Description: PinE Location: 2 2 817-2 3366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lnt (TIGR00546), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, PinE (COG1961)