myRT

myRT report for GCA_000250535.2_ASM25053v2

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Seq: AIHQ01000026.1 Escherichia coli DEC15C gecDEC15C.contig.25_1, whole genome shotgun sequence (279942 bp)
Overview 1 RT 1: 114830-117915 bp Neighborhood of RT #1 [114830, 117915] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 114830-115216 bp Feature: domain Description: PHA02517 Location: 114833-115214 bp Feature: domain Description: PHA0251 7 Location: 1 1 4833-1 1 521 4 bp Feature: gene Location: 115393-116901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115651-116383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 5651 -1 1 6383 bp Feature: domain Description: GIIM Note: maturase Location: 116458-116656 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 6458-1 1 6656 bp Feature: gene Location: 117508-117720 bp Feature: domain Description: PHA02517 Location: 117511-117655 bp Feature: domain Description: PHA0251 7 Location: 1 1 751 1 -1 1 7655 bp Feature: gene Location: 117802-117915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AIHQ01000014.1 Escherichia coli DEC15C gecDEC15C.contig.13_1, whole genome shotgun sequence (12864 bp)
Overview 1 RT 1: 1-3727 bp Neighborhood of RT #1 [1, 3729] PHA02517 RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 PRK09409 Feature: gene Location: 1-330 bp Feature: domain Description: PHA02517 Location: 4-328 bp Feature: domain Description: PHA02 517 Location: 4-32 8 bp Feature: gene Location: 507-2015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1497 bp Feature: domain Description: GIIM Note: maturase Location: 1572-1770 bp Feature: domain Description: GIIM Note: maturase Location: 1572 -1770 bp Feature: gene Location: 2622-3362 bp Feature: domain Description: HTH_Tnp_1 Location: 2634-2832 bp Feature: domain Description: HTH_Tnp_1 Location: 2 634-2 832 bp Feature: domain Description: HTH_Tnp_1 Location: 2937-3030 bp Feature: domain Description: HTH_Tnp_1 Location: 2 937-3030 bp Feature: gene Location: 3493-3729 bp Feature: domain Description: PRK09409 Location: 3559-3727 bp Feature: domain Description: PRK09409 Location: 3559-372 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PRK09409 (IS2 transposase TnpB; Reviewed), RVT-GII, GIIM (pfam08388)