myRT

myRT report for GCA_000250735.2_ASM25073v2

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Seq: AHZV01000208.1 Anaerophaga thermohalophila str. Valhall contig00250, whole genome shotgun sequence (29129 bp)
Overview 1 RT 1: 11993-16493 bp Neighborhood of RT #1 [11993, 16493] RVT-Retrons RVT-Retrons Feature: gene Location: 11993-12952 bp Feature: gene Location: 12961-13575 bp Feature: gene Location: 13615-14373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13618-14068 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 361 8-1 4068 bp Feature: gene Location: 14366-14749 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14564-14744 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4564-1 4744 bp Feature: gene Location: 15003-15635 bp Feature: gene Location: 15792-16493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: AHZV01000201.1 Anaerophaga thermohalophila str. Valhall contig00240, whole genome shotgun sequence (5863 bp)
Overview 1 RT 1: 3-5861 bp Neighborhood of RT #1 [3, 5861] RVT_N RVT-GII GIIM Feature: gene Location: 3-251 bp Feature: gene Location: 431-2641 bp Feature: gene Location: 3796-5265 bp Feature: RT Description: RVT_N Location: 3847-4090 bp Feature: RT Description: RVT_N Location: 3847-4090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4135-4792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4135-4792 bp Feature: domain Description: GIIM Note: maturase Location: 4846-5065 bp Feature: domain Description: GIIM Note: maturase Location: 4846-5065 bp Feature: gene Location: 5511-5861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: AHZV01000198.1 Anaerophaga thermohalophila str. Valhall contig00236, whole genome shotgun sequence (2161 bp)
Overview 1 RT 1: 3-1323 bp Neighborhood of RT #1 [3, 1355] RVT-GII GIIM Feature: gene Location: 3-167 bp Feature: gene Location: 180-1355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1107 bp Feature: domain Description: GIIM Note: maturase Location: 1188-1323 bp Feature: domain Description: GIIM Note: maturase Location: 1188-13 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AHZV01000045.1 Anaerophaga thermohalophila str. Valhall contig00053, whole genome shotgun sequence (10008 bp)
Overview 1 RT 1: 490-3420 bp Neighborhood of RT #1 [490, 3467] RVT_N RVT-GII GIIM Gp49 HTH_XRE Feature: gene Location: 490-633 bp Feature: gene Location: 695-838 bp Feature: gene Location: 1018-2523 bp Feature: RT Description: RVT_N Location: 1087-1330 bp Feature: RT Description: RVT_N Location: 1087-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375-1999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375-1999 bp Feature: domain Description: GIIM Note: maturase Location: 2056-2290 bp Feature: domain Description: GIIM Note: maturase Location: 2056-2290 bp Feature: gene Location: 2794-3141 bp Feature: domain Description: Gp49 Location: 2839-3103 bp Feature: domain Description: Gp4 9 Location: 2839-3103 bp Feature: gene Location: 3177-3467 bp Feature: domain Description: HTH_XRE Location: 3258-3420 bp Feature: domain Description: HTH_XRE Location: 3258-34 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Gp49 (pfam05973), HTH_XRE (smart00530)