myRT

myRT report for GCA_000252465.1_ASM25246v1

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Seq: JH608524.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14578, whole genome shotgun sequence (18843 bp)
Overview 1 RT 1: 6515-12546 bp Neighborhood of RT #1 [6515, 12546] COG1449 RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 6515-8272 bp Feature: domain Description: COG1449 Location: 6530-8048 bp Feature: domain Description: COG1 449 Location: 6530-8048 bp Feature: gene Location: 8327-8557 bp Feature: gene Location: 9312-10025 bp Feature: domain Description: RVT_N Location: 9315-9447 bp Feature: domain Description: RVT_N Location: 931 5-9447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9495-9966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9495-9966 bp Feature: gene Location: 9938-10954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9995-10166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9995-1 01 66 bp Feature: domain Description: GIIM Note: maturase Location: 10238-10472 bp Feature: domain Description: GIIM Note: maturase Location: 1 0238-1 0472 bp Feature: domain Description: HNHc Note: nucleases Location: 10697-10853 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0697-1 0853 bp Feature: gene Location: 11285-11578 bp Feature: gene Location: 12052-12546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1449 (Alpha-amylase/alpha-mannosidase, GH57 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JH608646.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig362, whole genome shotgun sequence (9078 bp)
Overview 1 RT 1: 107-2541 bp Neighborhood of RT #1 [107, 2777] RVT-GII HNHc DEDD_Tnp_IS110 Transposase_20 Feature: gene Location: 107-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-473 bp Feature: gene Location: 723-1283 bp Feature: domain Description: HNHc Note: nucleases Location: 954-1167 bp Feature: domain Description: HNHc Note: nucleases Location: 954-1167 bp Feature: gene Location: 1308-2777 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1476-1902 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1476-1902 bp Feature: domain Description: Transposase_20 Location: 2295-2541 bp Feature: domain Description: Transposase_2 0 Location: 2 2 95-2 541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)

Seq: JH608656.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14845, whole genome shotgun sequence (8767 bp)
Overview 1 RT 1: 2966-5896 bp Neighborhood of RT #1 [2966, 5958] RVT_N RVT-GII HNHc Uma2 Feature: gene Location: 2966-3526 bp Feature: gene Location: 3368-3745 bp Feature: domain Description: RVT_N Location: 3422-3668 bp Feature: domain Description: RVT_N Location: 3 422-3 668 bp Feature: gene Location: 3922-4548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3928-4387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 928-43 87 bp Feature: gene Location: 4629-5222 bp Feature: domain Description: HNHc Note: nucleases Location: 4911-5073 bp Feature: domain Description: HNHc Note: nucleases Location: 4911-5073 bp Feature: gene Location: 5332-5958 bp Feature: domain Description: Uma2 Location: 5377-5896 bp Feature: domain Description: Uma2 Location: 53 77-5896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HNHc (smart00507), Uma2 (pfam05685)

Seq: JH608768.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14564, whole genome shotgun sequence (6321 bp)
Overview 1 RT 1: 2273-5821 bp Neighborhood of RT #1 [2273, 5859] RVT_N RVT-GII RVT-GII GIIM HTH_OrfB_IS605 InsQ Feature: gene Location: 2273-2440 bp Feature: gene Location: 2568-2699 bp Feature: gene Location: 2748-3992 bp Feature: domain Description: RVT_N Location: 2787-3030 bp Feature: domain Description: RVT_N Location: 2787-3030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3081-3510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3081-3510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3522-3684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3522-3684 bp Feature: domain Description: GIIM Note: maturase Location: 3741-3951 bp Feature: domain Description: GIIM Note: maturase Location: 374 1-3951 bp Feature: gene Location: 4408-4560 bp Feature: gene Location: 4627-5859 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4750-4849 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4 750-4 84 9 bp Feature: domain Description: InsQ Location: 4924-5821 bp Feature: domain Description: InsQ Location: 4 924 -5821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_OrfB_IS605 (pfam12323), InsQ (COG0675)

Seq: JH608975.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig435, whole genome shotgun sequence (3720 bp)
Overview 1 RT 1: 361-3001 bp Neighborhood of RT #1 [361, 3171] Transposase_20 DEDD_Tnp_IS110 RVT-GII GIIM HNHc Feature: gene Location: 361-957 bp Feature: domain Description: Transposase_20 Location: 577-823 bp Feature: domain Description: Transposase_20 Location: 5 77-823 bp Feature: gene Location: 1035-1463 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1062-1365 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1062-1365 bp Feature: gene Location: 1903-3171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1915-2314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1915 -2314 bp Feature: domain Description: GIIM Note: maturase Location: 2386-2620 bp Feature: domain Description: GIIM Note: maturase Location: 2386-2620 bp Feature: domain Description: HNHc Note: nucleases Location: 2845-3001 bp Feature: domain Description: HNHc Note: nucleases Location: 2845 -3001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), DEDD_Tnp_IS110 (pfam01548), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JH609022.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14832, whole genome shotgun sequence (3309 bp)
Overview 1 RT 1: 121-3016 bp Neighborhood of RT #1 [121, 3045] RVT-GII GIIM HNHc RVT_N RVT_N RVT-GII Feature: gene Location: 121-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127-496 bp Feature: domain Description: GIIM Note: maturase Location: 598-832 bp Feature: domain Description: GIIM Note: maturase Location: 598-832 bp Feature: domain Description: HNHc Note: nucleases Location: 1039-1192 bp Feature: domain Description: HNHc Note: nucleases Location: 1039-1192 bp Feature: gene Location: 1505-1897 bp Feature: domain Description: RVT_N Location: 1553-1799 bp Feature: domain Description: RVT_N Location: 1553-1799 bp Feature: gene Location: 2286-2441 bp Feature: gene Location: 2587-3045 bp Feature: domain Description: RVT_N Location: 2641-2887 bp Feature: domain Description: RVT_N Location: 26 41-2887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2935-3016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2935-3016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JH609190.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14354, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1856 bp Neighborhood of RT #1 [1, 1856] RVT_N RVT-GII GIIM Feature: gene Location: 1-150 bp Feature: gene Location: 387-1625 bp Feature: domain Description: RVT_N Location: 420-663 bp Feature: domain Description: RVT_N Location: 420-663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 711-1317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 11-1317 bp Feature: domain Description: GIIM Note: maturase Location: 1374-1587 bp Feature: domain Description: GIIM Note: maturase Location: 137 4-1587 bp Feature: gene Location: 1566-1856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JH609311.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig15363, whole genome shotgun sequence (1765 bp)
Overview 1 RT 1: 54-851 bp Neighborhood of RT #1 [54, 1762] RVT-GII Exo_endo_phos_2 Feature: gene Location: 54-341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-300 bp Feature: gene Location: 359-1762 bp Feature: domain Description: Exo_endo_phos_2 Location: 530-851 bp Feature: domain Description: Exo_endo_phos_2 Location: 530-8 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Exo_endo_phos_2 (pfam14529)

Seq: JH609366.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14946, whole genome shotgun sequence (1565 bp)
Overview 1 RT 1: 26-1565 bp Neighborhood of RT #1 [26, 1564] RVT_N RVT-GII Feature: gene Location: 26-217 bp Feature: gene Location: 593-769 bp Feature: gene Location: 1094-1564 bp Feature: domain Description: RVT_N Location: 1148-1394 bp Feature: domain Description: RVT_N Location: 1148-139 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442-1565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442-1565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JH609533.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14552, whole genome shotgun sequence (1100 bp)
Overview 1 RT 1: 2-1034 bp Neighborhood of RT #1 [2, 1099] RVT_N RVT-GII Feature: gene Location: 2-391 bp Feature: domain Description: RVT_N Location: 68-314 bp Feature: domain Description: RVT_N Location: 68-314 bp Feature: gene Location: 437-1099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-10 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JH609620.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14947, whole genome shotgun sequence (962 bp)
Overview 1 RT 1: 38-954 bp Neighborhood of RT #1 [38, 959] RVT_N RVT-GII Feature: gene Location: 38-301 bp Feature: domain Description: RVT_N Location: 92-272 bp Feature: domain Description: RVT_N Location: 92-272 bp Feature: gene Location: 426-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JH609702.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig2351, whole genome shotgun sequence (868 bp)
Overview 1 RT 1: 2-317 bp Neighborhood of RT #1 [2, 316] RVT-CRISPR-like Feature: gene Location: 2-316 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 65-317 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 65-317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JH609868.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig14831, whole genome shotgun sequence (736 bp)
Overview 1 RT 1: 3-735 bp Neighborhood of RT #1 [3, 735] RVT-GII Feature: gene Location: 3-176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-171 bp Feature: gene Location: 550-735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JH610465.1 Prochloron didemni P3-Solomon genomic scaffold Scf_contig1156, whole genome shotgun sequence (501 bp)
Overview 1 RT 1: 3-483 bp Neighborhood of RT #1 [3, 500] RVT-GII GIIM Feature: gene Location: 3-500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Feature: domain Description: GIIM Note: maturase Location: 249-483 bp Feature: domain Description: GIIM Note: maturase Location: 249-483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)