myRT

myRT report for GCA_000256165.2_ASM25616v2

Download annotations/find similar RTs

Seq: AIDC02000226.1 Vibrio cyclitrophicus 1F273 1F-273_contig_78, whole genome shotgun sequence (2594 bp)
Overview 1 RT 1: 47-2594 bp Neighborhood of RT #1 [47, 2594] RVT-GII GIIM Feature: gene Location: 47-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-455 bp Feature: domain Description: GIIM Note: maturase Location: 500-710 bp Feature: domain Description: GIIM Note: maturase Location: 500-71 0 bp Feature: gene Location: 997-1422 bp Feature: gene Location: 2400-2594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AIDC02000107.1 Vibrio cyclitrophicus 1F273 1F-273_contig_295, whole genome shotgun sequence (134515 bp)
Overview 1 RT 1: 90326-94207 bp Neighborhood of RT #1 [90326, 94207] RVT-DGRs Avd_like Feature: gene Location: 90326-90640 bp Feature: gene Location: 90637-90816 bp Feature: gene Location: 91023-92066 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91215-91902 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 912 15-91902 bp Feature: gene Location: 92339-92632 bp Feature: domain Description: Avd_like Location: 92345-92624 bp Feature: domain Description: Avd_like Location: 92 345-92 62 4 bp Feature: gene Location: 92729-94207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: AIDC02000013.1 Vibrio cyclitrophicus 1F273 1F-273_contig_122, whole genome shotgun sequence (32527 bp)
Overview 1 RT 1: 18057-24709 bp Neighborhood of RT #1 [18057, 24714] ADPrib_exo_Tox RES RVT_N RVT-GII GIIM PRK04980 Feature: gene Location: 18057-18887 bp Feature: domain Description: ADPrib_exo_Tox Location: 18339-18855 bp Feature: domain Description: ADPrib_exo_Tox Location: 183 3 9-18855 bp Feature: gene Location: 19209-20495 bp Feature: domain Description: RES Location: 19827-20292 bp Feature: domain Description: RES Location: 19827-20292 bp Feature: gene Location: 21136-22767 bp Feature: RT Description: RVT_N Location: 21343-21586 bp Feature: RT Description: RVT_N Location: 213 43 -21586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21631-22258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2163 1-22258 bp Feature: domain Description: GIIM Note: maturase Location: 22318-22543 bp Feature: domain Description: GIIM Note: maturase Location: 223 18-22543 bp Feature: gene Location: 23042-23950 bp Feature: gene Location: 24379-24714 bp Feature: domain Description: PRK04980 Location: 24409-24709 bp Feature: domain Description: PRK04980 Location: 24409-24709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADPrib_exo_Tox (pfam03496), RES (smart00953), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK04980 (hypothetical protein; Provisional)

Seq: AIDC02000047.1 Vibrio cyclitrophicus 1F273 1F-273_contig_18, whole genome shotgun sequence (1575 bp)
Overview 1 RT 1: 71-1175 bp Neighborhood of RT #1 [71, 1354] RVT-GII GIIM Feature: gene Location: 71-1354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284 -905 bp Feature: domain Description: GIIM Note: maturase Location: 950-1175 bp Feature: domain Description: GIIM Note: maturase Location: 950-1175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)