myRT

myRT report for GCA_000256465.2_ASM25646v2

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Seq: AIDR02000034.1 Vibrio cyclitrophicus ZF270 ZF-270_contig_453, whole genome shotgun sequence (963449 bp)
Overview 1 RT 1: 394613-401547 bp Neighborhood of RT #1 [394613, 401547] INT_RitA_C_like RVT_N RVT-GII GIIM DUF4917 Feature: gene Location: 394613-395470 bp Feature: gene Location: 395718-396314 bp Ori: OEE01388.1 Feature: domain Description: INT_RitA_C_like Location: 395766-396288 bp Feature: domain Description: INT_RitA_C_like Location: 395766-396288 bp Feature: gene Location: 396475-397947 bp Ori: OEE01389.1 Feature: domain Description: RVT_N Location: 396523-396766 bp Feature: domain Description: RVT_N Location: 396523-396766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396811-397438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39681 1 -397438 bp Feature: domain Description: GIIM Note: maturase Location: 397495-397723 bp Feature: domain Description: GIIM Note: maturase Location: 397495-397723 bp Feature: gene Location: 398970-399953 bp Ori: OEE01390.1 Feature: domain Description: DUF4917 Location: 399033-399951 bp Feature: domain Description: DUF491 7 Location: 399033-399951 bp Feature: gene Location: 399961-401547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitA_C_like (cd01188), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4917 (pfam16263)

Seq: AIDR02000018.1 Vibrio cyclitrophicus ZF270 ZF-270_contig_22, whole genome shotgun sequence (1165394 bp)
Overview 1 RT 1: 429722-439208 bp Neighborhood of RT #1 [429722, 439210] MhpC RVT-UG3 RVT-UG8 pheT Feature: gene Location: 429722-430648 bp Feature: gene Location: 431247-431471 bp Ori: OEE06576.1 Feature: domain Description: MhpC Location: 431352-431454 bp Feature: domain Description: MhpC Location: 431352 -431454 bp Feature: gene Location: 431717-432979 bp Ori: OEE06577.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 432005-432503 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 432 005-432 503 bp Feature: gene Location: 432969-434921 bp Ori: OEE06578.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 433473-433923 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 433473-43392 3 bp Feature: gene Location: 435559-436563 bp Feature: gene Location: 436805-439210 bp Ori: OEE06580.1 Feature: domain Description: pheT Location: 436808-439208 bp Feature: domain Description: pheT Location: 436808-4392 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-UG3, RVT-UG8, pheT (PRK09616)

Seq: AIDR02000030.1 Vibrio cyclitrophicus ZF270 ZF-270_contig_381, whole genome shotgun sequence (1740795 bp)
Overview 1 RT 1: 193501-199303 bp Neighborhood of RT #1 [193501, 199303] TIGR03982 SAM_quin_mod RVT_N RVT-GII GIIM RES Feature: gene Location: 193501-193857 bp Ori: OEE02577.1 Feature: domain Description: TIGR03982 Location: 193507-193855 bp Feature: domain Description: TIGR03 982 Location: 193 507-193 855 bp Feature: gene Location: 193858-195093 bp Ori: OEE02578.1 Feature: domain Description: SAM_quin_mod Location: 193867-195091 bp Feature: domain Description: SAM_quin_mod Location: 193 867-195091 bp Feature: gene Location: 196094-197566 bp Ori: OEE02579.1 Feature: domain Description: RVT_N Location: 196142-196382 bp Feature: domain Description: RVT_N Location: 196142-1963 82 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196430-197057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19643 0-197057 bp Feature: domain Description: GIIM Note: maturase Location: 197114-197342 bp Feature: domain Description: GIIM Note: maturase Location: 197114-1973 42 bp Feature: gene Location: 197740-198450 bp Ori: OEE02580.1 Feature: domain Description: RES Location: 197905-198328 bp Feature: domain Description: RES Location: 197905-1983 28 bp Feature: gene Location: 198443-199303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03982 (His-Xaa-Ser system protein, TIGR03982 family), SAM_quin_mod (TIGR03981), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RES (smart00953)