myRT

myRT report for GCA_000256585.3_ASM25658v3

Download annotations/find similar RTs

Seq: AJHK02000012.1 Burkholderia sp. SJ98 contig12, whole genome shotgun sequence (1314594 bp)
Overview 1 RT 1: 1061976-1067435 bp Neighborhood of RT #1 [1061976, 1067473] 4HB_MCP_1 PRK15048 RVT-Retrons Dabb Histone_HNS Feature: gene Location: 1061976-1062272 bp Feature: gene Location: 1062286-1064010 bp Feature: domain Description: 4HB_MCP_1 Location: 1062307-1062841 bp Feature: domain Description: 4HB_MCP_1 Location: 1 062307-1 062841 bp Feature: domain Description: PRK15048 Location: 1062970-1063897 bp Feature: domain Description: PRK1 5048 Location: 1 062970-1 063897 bp Feature: gene Location: 1064469-1066220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1064622-1065231 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 064622-1 065231 bp Feature: gene Location: 1066469-1066771 bp Feature: domain Description: Dabb Location: 1066475-1066766 bp Feature: domain Description: Dabb Location: 1 066475-1 066766 bp Feature: gene Location: 1067174-1067473 bp Feature: domain Description: Histone_HNS Location: 1067204-1067435 bp Feature: domain Description: Histone_HNS Location: 1 067204-1 067435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 4HB_MCP_1 (pfam12729), PRK15048 (methyl-accepting chemotaxis protein II; Provisional), RVT-Retrons, Dabb (smart00886), Histone_HNS (pfam00816)

Seq: AJHK02000002.1 Burkholderia sp. SJ98 contig02, whole genome shotgun sequence (306625 bp)
Overview 1 RT 1: 246055-250709 bp Neighborhood of RT #1 [246055, 250732] CusF_Ec dipZ RVT-GII GIIM dipZ P-II Feature: gene Location: 246055-246408 bp Feature: domain Description: CusF_Ec Location: 246199-246391 bp Feature: domain Description: CusF_Ec Location: 2 46199-2 46391 bp Feature: gene Location: 246472-248145 bp Feature: domain Description: dipZ Location: 246544-247789 bp Feature: domain Description: dipZ Location: 2 46544-2 47789 bp Feature: gene Location: 248100-249473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248454-249117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 48454-2 49117 bp Feature: domain Description: GIIM Note: maturase Location: 249186-249399 bp Feature: domain Description: GIIM Note: maturase Location: 2 49186-2 49399 bp Feature: gene Location: 249909-250328 bp Feature: domain Description: dipZ Location: 249948-250323 bp Feature: domain Description: dipZ Location: 2 49948-2 5032 3 bp Feature: gene Location: 250415-250732 bp Feature: domain Description: P-II Location: 250433-250709 bp Feature: domain Description: P-II Location: 2 50433-2 50709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CusF_Ec (pfam11604), dipZ (PRK00293), RVT-GII, GIIM (pfam08388), P-II (smart00938)