myRT

myRT report for GCA_000256605.2_ASM25660v2

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Seq: AIDF02000091.1 Vibrio cyclitrophicus FF160 FF-160_contig_69, whole genome shotgun sequence (1574 bp)
Overview 1 RT 1: 71-1175 bp Neighborhood of RT #1 [71, 1354] RVT-GII GIIM Feature: gene Location: 71-1354 bp Ori: OEE81654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-905 bp Feature: domain Description: GIIM Note: maturase Location: 950-1175 bp Feature: domain Description: GIIM Note: maturase Location: 950-1 1 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AIDF02000048.1 Vibrio cyclitrophicus FF160 FF-160_contig_22, whole genome shotgun sequence (160651 bp)
Overview 1 RT 1: 155-2321 bp Neighborhood of RT #1 [155, 2359] RVT-Retrons HTH_XRE COG4190 Feature: gene Location: 155-1114 bp Ori: OEE83166.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 329-884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 9-884 bp Feature: gene Location: 1095-1400 bp Ori: OEE83167.1 Feature: domain Description: HTH_XRE Location: 1110-1272 bp Feature: domain Description: HTH_XRE Location: 1110-12 72 bp Feature: gene Location: 1979-2359 bp Ori: OEE83168.1 Feature: domain Description: COG4190 Location: 1991-2321 bp Feature: domain Description: COG4190 Location: 1991-2 32 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), COG4190 (Predicted transcriptional regulator )

Seq: AIDF02000001.1 Vibrio cyclitrophicus FF160 FF-160_contig_0_0, whole genome shotgun sequence (52593 bp)
Overview 1 RT 1: 4187-8882 bp Neighborhood of RT #1 [4187, 8882] Acetyltransf_1 SLATT_5 RVT-UG17 Feature: gene Location: 4187-4609 bp Ori: OEE85861.1 Feature: domain Description: Acetyltransf_1 Location: 4322-4556 bp Feature: domain Description: Acetyltransf_1 Location: 43 22-4556 bp Feature: gene Location: 5209-5832 bp Ori: OEE85862.1 Feature: domain Description: SLATT_5 Location: 5215-5659 bp Feature: domain Description: SLATT_5 Location: 5215-5659 bp Feature: gene Location: 5832-7175 bp Ori: OEE85863.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6063-6669 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6063 -6669 bp Feature: gene Location: 8305-8547 bp Feature: gene Location: 8631-8882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), SLATT_5 (pfam18160), RVT-UG17

Seq: AIDF02000084.1 Vibrio cyclitrophicus FF160 FF-160_contig_6, whole genome shotgun sequence (59357 bp)
Overview 1 RT 1: 528-4879 bp Neighborhood of RT #1 [528, 4884] metallo-hydrolase-like_MBL-fold RVT-Retrons Tra8 Feature: gene Location: 528-1373 bp Ori: OEE81879.1 Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 633-1359 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 633-1359 bp Feature: gene Location: 2015-3214 bp Ori: OEE81880.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2162-2744 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2162-274 4 bp Feature: gene Location: 3192-3920 bp Feature: gene Location: 3952-4884 bp Ori: OEE81882.1 Feature: domain Description: Tra8 Location: 3958-4879 bp Feature: domain Description: Tra8 Location: 3958-4 879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT metallo-hydrolase-like_MBL-fold (cl23716), RVT-Retrons, Tra8 (COG2826)

Seq: AIDF02000034.1 Vibrio cyclitrophicus FF160 FF-160_contig_146, whole genome shotgun sequence (176587 bp)
Overview 1 RT 1: 33002-38839 bp Neighborhood of RT #1 [33002, 38839] SH3_3 RVT-UG2 Feature: gene Location: 33002-33658 bp Feature: gene Location: 33786-34775 bp Ori: OEE84123.1 Feature: domain Description: SH3_3 Location: 34596-34758 bp Feature: domain Description: SH3_3 Location: 345 96-3475 8 bp Feature: gene Location: 35273-36583 bp Ori: OEE84124.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 35474-36287 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 35 474-36287 bp Feature: gene Location: 37069-37605 bp Feature: gene Location: 37694-38839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_3 (pfam08239), RVT-UG2