myRT

myRT report for GCA_000257185.1_ASM25718v1

Download annotations/find similar RTs

Seq: AEZB01000096.1 Vibrio anguillarum RV22 contig00099, whole genome shotgun sequence (61797 bp)
Overview 1 RT 1: 2684-9607 bp Neighborhood of RT #1 [2684, 9615] PRK10473 PRK10216 RVT_N RVT-GII GIIM PRK12440 CeuD Feature: gene Location: 2684-3937 bp Feature: domain Description: PRK10473 Location: 2753-3926 bp Feature: domain Description: PRK1 0473 Location: 2753-3926 bp Feature: gene Location: 3912-4868 bp Feature: domain Description: PRK10216 Location: 3915-4860 bp Feature: domain Description: PRK1 021 6 Location: 391 5-4860 bp Feature: gene Location: 5570-7042 bp Feature: RT Description: RVT_N Location: 5618-5861 bp Feature: RT Description: RVT_N Location: 561 8-5861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6533 bp Feature: domain Description: GIIM Note: maturase Location: 6596-6818 bp Feature: domain Description: GIIM Note: maturase Location: 6596-681 8 bp Feature: gene Location: 7331-8524 bp Feature: domain Description: PRK12440 Location: 7334-8522 bp Feature: domain Description: PRK1 2440 Location: 7334-8522 bp Feature: gene Location: 8854-9615 bp Feature: domain Description: CeuD Location: 8857-9607 bp Feature: domain Description: CeuD Location: 8857-9607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK12440 (acetate/propionate family kinase), CeuD (COG4604)

Seq: AEZB01000132.1 Vibrio anguillarum RV22 contig00153, whole genome shotgun sequence (18604 bp)
Overview 1 RT 1: 6329-11848 bp Neighborhood of RT #1 [6329, 11859] YegP RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 6329-6898 bp Feature: gene Location: 7191-7343 bp Feature: domain Description: YegP Location: 7194-7311 bp Feature: domain Description: YegP Location: 7194-7311 bp Feature: gene Location: 7450-9129 bp Feature: RT Description: RVT_N Location: 7522-7762 bp Feature: RT Description: RVT_N Location: 752 2 -7762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7810-8455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7810-8455 bp Feature: domain Description: GIIM Note: maturase Location: 8506-8740 bp Feature: domain Description: GIIM Note: maturase Location: 8506-8740 bp Feature: domain Description: HNHc Note: nucleases Location: 8956-9118 bp Feature: domain Description: HNHc Note: nucleases Location: 8956-9118 bp Feature: gene Location: 9413-9562 bp Feature: gene Location: 10225-11859 bp Feature: domain Description: groEL Location: 10231-11848 bp Feature: domain Description: groEL Location: 102 31-11848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), YegP (COG3422), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: AEZB01000182.1 Vibrio anguillarum RV22 contig00208, whole genome shotgun sequence (2009 bp)
Overview 1 RT 1: 54-1674 bp Neighborhood of RT #1 [54, 1898] RVT_N RVT-GII GIIM Feature: gene Location: 54-185 bp Feature: gene Location: 426-1898 bp Feature: RT Description: RVT_N Location: 474-717 bp Feature: RT Description: RVT_N Location: 474-717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-13 89 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1674 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)