myRT

myRT report for GCA_000257765.1_ASM25776v1

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Seq: AICP01000073.1 Streptococcus anginosus subsp. whileyi CCUG 39159 ctg120005254417, whole genome shotgun sequence (3998 bp)
Overview 1 RT 1: 1393-3998 bp Neighborhood of RT #1 [1393, 3998] RVT-GII HNHc Feature: gene Location: 1393-1572 bp Feature: gene Location: 1704-1892 bp Feature: gene Location: 2092-3249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2110-2446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 0-2446 bp Feature: domain Description: HNHc Note: nucleases Location: 2977-3139 bp Feature: domain Description: HNHc Note: nucleases Location: 2977-31 39 bp Feature: gene Location: 3512-3998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: AICP01000012.1 Streptococcus anginosus subsp. whileyi CCUG 39159 ctg120005254425, whole genome shotgun sequence (79904 bp)
Overview 1 RT 1: 69609-79395 bp Neighborhood of RT #1 [69609, 79799] Cyt_C5_DNA_methylase COG4646 COG4646 HELICc RVT_N RVT-GII GIIM Feature: gene Location: 69609-70586 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 69651-70581 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 69651-70581 bp Feature: gene Location: 70596-77573 bp Feature: domain Description: COG4646 Location: 74355-75111 bp Feature: domain Description: COG4646 Location: 74355-75111 bp Feature: domain Description: COG4646 Location: 75219-77079 bp Feature: domain Description: COG4646 Location: 752 19-77079 bp Feature: domain Description: HELICc Location: 77130-77496 bp Feature: domain Description: HELICc Location: 77130-77496 bp Feature: gene Location: 78129-79799 bp Feature: RT Description: RVT_N Location: 78174-78417 bp Feature: RT Description: RVT_N Location: 78174-78417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78462-79110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78462 -79110 bp Feature: domain Description: GIIM Note: maturase Location: 79164-79395 bp Feature: domain Description: GIIM Note: maturase Location: 79164-79395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cyt_C5_DNA_methylase (cl30459), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: AICP01000021.1 Streptococcus anginosus subsp. whileyi CCUG 39159 ctg120005254416, whole genome shotgun sequence (23705 bp)
Overview 1 RT 1: 12942-23196 bp Neighborhood of RT #1 [12942, 23600] AbiEii PHA03411 COG4646 COG4646 HELICc RVT_N RVT-GII GIIM Feature: gene Location: 12942-13949 bp Feature: domain Description: AbiEii Location: 13065-13899 bp Feature: domain Description: AbiEii Location: 13 065-13 899 bp Feature: gene Location: 14019-21374 bp Feature: domain Description: PHA03411 Location: 17544-17853 bp Feature: domain Description: PHA03 411 Location: 17544-17853 bp Feature: domain Description: COG4646 Location: 18168-18903 bp Feature: domain Description: COG4646 Location: 18168-18903 bp Feature: domain Description: COG4646 Location: 19170-20880 bp Feature: domain Description: COG4646 Location: 19170-20880 bp Feature: domain Description: HELICc Location: 20928-21294 bp Feature: domain Description: HELICc Location: 20928-21294 bp Feature: gene Location: 21930-23600 bp Feature: RT Description: RVT_N Location: 21975-22218 bp Feature: RT Description: RVT_N Location: 21975-22218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22263-22911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22263 -22911 bp Feature: domain Description: GIIM Note: maturase Location: 22965-23196 bp Feature: domain Description: GIIM Note: maturase Location: 22965-23 196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: AICP01000048.1 Streptococcus anginosus subsp. whileyi CCUG 39159 ctg120005254449, whole genome shotgun sequence (150348 bp)
Overview 1 RT 1: 88424-94615 bp Neighborhood of RT #1 [88424, 94683] prfB HAD_YbiV-Like RVT-GII Intron_maturas2 HNHc acc_ester DUF2785 Feature: gene Location: 88424-89401 bp Feature: domain Description: prfB Location: 88427-89396 bp Feature: domain Description: prfB Location: 884 27-89396 bp Feature: gene Location: 89787-90458 bp Feature: domain Description: HAD_YbiV-Like Location: 89811-90456 bp Feature: domain Description: HAD_YbiV-Like Location: 89811-904 56 bp Feature: gene Location: 90885-92663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-91938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9114 6-91938 bp Feature: domain Description: Intron_maturas2 Location: 92043-92274 bp Feature: domain Description: Intron_maturas2 Location: 9204 3-92274 bp Feature: domain Description: HNHc Note: nucleases Location: 92454-92625 bp Feature: domain Description: HNHc Note: nucleases Location: 924 54 -92625 bp Feature: gene Location: 93062-93895 bp Feature: domain Description: acc_ester Location: 93170-93716 bp Feature: domain Description: acc_ester Location: 93170-93716 bp Feature: gene Location: 93892-94683 bp Feature: domain Description: DUF2785 Location: 94144-94615 bp Feature: domain Description: DUF2785 Location: 94 14 4 -94 615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfB (TIGR00020), HAD_YbiV-Like (cd07518), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), acc_ester (TIGR03729), DUF2785 (pfam10978)

Seq: AICP01000017.1 Streptococcus anginosus subsp. whileyi CCUG 39159 ctg120005254442, whole genome shotgun sequence (20934 bp)
Overview 1 RT 1: 17158-20934 bp Neighborhood of RT #1 [17158, 20934] SSB_OBF Maff2 RVT-GII KOG4768 HNHc Feature: gene Location: 17158-17469 bp Feature: domain Description: SSB_OBF Location: 17185-17428 bp Feature: domain Description: SSB_OBF Location: 17185 -17428 bp Feature: gene Location: 17473-17604 bp Feature: domain Description: Maff2 Location: 17476-17602 bp Feature: domain Description: Maff2 Location: 17476-17602 bp Feature: gene Location: 18326-20185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18644-19382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18644-19382 bp Feature: domain Description: KOG4768 Location: 19511-19661 bp Feature: domain Description: KOG4768 Location: 195 11-19661 bp Feature: domain Description: HNHc Note: nucleases Location: 19913-20075 bp Feature: domain Description: HNHc Note: nucleases Location: 19913-20075 bp Feature: gene Location: 20448-20934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), Maff2 (pfam12750), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HNHc (smart00507)