myRT

myRT report for GCA_000257985.1_SaureusISMv1.0

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Seq: AJLD01000048.1 Staphylococcus aureus subsp. aureus IS-M contig00024, whole genome shotgun sequence (60190 bp)
Overview 1 RT 1: 23832-29692 bp Neighborhood of RT #1 [23832, 29692] AlsD PRK08617 RVT-Retrons Feature: gene Location: 23832-24206 bp Ori: EID38279.1 Feature: domain Description: AlsD Location: 23835-24195 bp Feature: domain Description: AlsD Location: 23835-241 95 bp Feature: gene Location: 24243-25907 bp Ori: EID38237.1 Gene: alsS Feature: domain Description: PRK08617 Location: 24252-25899 bp Feature: domain Description: PRK0861 7 Location: 24252-25899 bp Feature: gene Location: 27157-28173 bp Ori: EID38259.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27307-27844 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27307-27844 bp Feature: gene Location: 28418-29047 bp Feature: gene Location: 29225-29692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlsD (COG3527), PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: AJLD01000036.1 Staphylococcus aureus subsp. aureus IS-M contig00011, whole genome shotgun sequence (27691 bp)
Overview 1 RT 1: 3627-10173 bp Neighborhood of RT #1 [3627, 10173] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 3627-5384 bp Ori: EID39533.1 Gene: blaR Feature: domain Description: MecR1 Location: 3630-4659 bp Feature: domain Description: MecR1 Location: 3630-4659 bp Feature: domain Description: Transpeptidase Location: 4713-5358 bp Feature: domain Description: Transpeptidase Location: 4713-5358 bp Feature: gene Location: 5491-6336 bp Ori: EID39514.1 Feature: domain Description: PenP Location: 5503-6328 bp Feature: domain Description: PenP Location: 5503-632 8 bp Feature: gene Location: 6690-7781 bp Ori: EID39522.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6693-6873 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6693-6873 bp Feature: gene Location: 7868-8458 bp Ori: EID39535.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 8342-8441 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 8342 -8441 bp Feature: gene Location: 8997-9605 bp Feature: gene Location: 9685-10173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK