myRT

myRT report for GCA_000260135.1_ASM26013v1

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Seq: JH651384.1 Thiothrix nivea DSM 5205 genomic scaffold Thiniscaffold_4, whole genome shotgun sequence (4638170 bp)
Overview 1 RT 1: 1652038-1658332 bp 2 RT 2: 3374071-3382834 bp Neighborhood of RT #1 [1652038, 1658376] Wzy_C RVT-GII GIIM LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Neighborhood of RT #2 [3374071, 3382878] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 pfam00656 YbgF YbgF RVT-DGRs DUF820 PRK10865 Feature: gene Location: 1652038-1653399 bp Feature: domain Description: Wzy_C Location: 1652728-1653148 bp Feature: domain Description: Wzy_C Location: 1 652728-1 6531 48 bp Feature: gene Location: 1653595-1653861 bp Feature: gene Location: 1655261-1656340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1655465-1656122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 655465-1 6561 22 bp Feature: domain Description: GIIM Note: maturase Location: 1656200-1656335 bp Feature: domain Description: GIIM Note: maturase Location: 1 656200-1 656335 bp Feature: gene Location: 1656347-1657972 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1656488-1656692 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 656488-1 656692 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1656917-1657781 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 65691 7-1 657781 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1657802-1657916 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 657802-1 65791 6 bp Feature: gene Location: 1658008-1658376 bp Feature: domain Description: TnpB_IS66 Location: 1658047-1658332 bp Feature: domain Description: TnpB_IS66 Location: 1 658047-1 658332 bp Feature: gene Location: 3374071-3375297 bp Feature: domain Description: zf-ISL3 Location: 3374236-3374320 bp Feature: domain Description: zf-ISL3 Location: 3374236-3374320 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3374350-3374500 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3374350-3374500 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3374545-3375244 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3374545-3375244 bp Feature: gene Location: 3376068-3377759 bp Feature: domain Description: pfam00656 Location: 3376188-3376848 bp Feature: domain Description: pfam00656 Location: 33761 88-3376848 bp Feature: domain Description: YbgF Location: 3376917-3377295 bp Feature: domain Description: YbgF Location: 337691 7-3377295 bp Feature: domain Description: YbgF Location: 3377349-3377727 bp Feature: domain Description: YbgF Location: 3377349-3377727 bp Feature: gene Location: 3378078-3379085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3378282-3378930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3378282-3378930 bp Feature: gene Location: 3379407-3379985 bp Feature: domain Description: DUF820 Location: 3379476-3379956 bp Feature: domain Description: DUF820 Location: 3379476-3379956 bp Feature: gene Location: 3380266-3382878 bp Feature: domain Description: PRK10865 Location: 3380269-3382834 bp Feature: domain Description: PRK1 0865 Location: 3380269-3382834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Wzy_C (pfam04932), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)
pfam00656 (Peptidase_C14;Caspase domain), YbgF (COG1729), RVT-DGRs, DUF820, PRK10865 (ATP-dependent chaperone ClpB)