myRT

myRT report for GCA_000261485.1_05684

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Seq: AJQT01000006.1 Ensifer sojae CCBAU 05684 Scaffold1.contig6, whole genome shotgun sequence (92123 bp)
Overview 1 RT 1: 18535-23788 bp Neighborhood of RT #1 [18535, 23788] RVT-UG12 Feature: gene Location: 18535-19491 bp Feature: gene Location: 19652-20116 bp Feature: gene Location: 20904-22169 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 20925-21333 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 20925-21 333 bp Feature: gene Location: 22397-23278 bp Feature: gene Location: 23297-23788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: AJQT01000145.1 Ensifer sojae CCBAU 05684 Scaffold59, whole genome shotgun sequence (8035 bp)
Overview 1 RT 1: 1785-6575 bp Neighborhood of RT #1 [1785, 6700] COG4644 RVT-GII RVT-GII HTH_21 HTH_Tnp_1 Feature: gene Location: 1785-2114 bp Feature: domain Description: COG4644 Location: 1800-2109 bp Feature: domain Description: COG4644 Location: 1800-2 109 bp Feature: gene Location: 2115-2960 bp Feature: gene Location: 2966-3736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2972-3581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 972 -3581 bp Feature: gene Location: 4024-4197 bp Feature: gene Location: 4529-5854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4784-5474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4784-5474 bp Feature: gene Location: 6045-6278 bp Feature: domain Description: HTH_21 Location: 6054-6159 bp Feature: domain Description: HTH_2 1 Location: 6054-6159 bp Feature: gene Location: 6350-6700 bp Feature: domain Description: HTH_Tnp_1 Location: 6353-6575 bp Feature: domain Description: HTH_Tnp_1 Location: 6353-6575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4644 (Transposase and inactivated derivatives, TnpA family ), RVT-GII, HTH_21 (pfam13276), HTH_Tnp_1 (pfam01527)

Seq: AJQT01000207.1 Ensifer sojae CCBAU 05684 Scaffold117, whole genome shotgun sequence (1079 bp)
Overview 1 RT 1: 131-650 bp Neighborhood of RT #1 [131, 1012] RVT-GII Feature: gene Location: 131-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII