myRT

myRT report for GCA_000261505.1_05737

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Seq: AJPV01000557.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold77.contig2, whole genome shotgun sequence (10427 bp)
Overview 1 RT 1: 52-3869 bp Neighborhood of RT #1 [52, 3931] DDE_Tnp_IS66 RVT-GII GIIM LomR PHA02518 Feature: gene Location: 52-570 bp Feature: domain Description: DDE_Tnp_IS66 Location: 235-553 bp Feature: domain Description: DDE_Tnp_IS66 Location: 235-553 bp Feature: gene Location: 719-2047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010-1673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 0-1 673 bp Feature: domain Description: GIIM Note: maturase Location: 1739-1961 bp Feature: domain Description: GIIM Note: maturase Location: 1 739-1 961 bp Feature: gene Location: 1983-2819 bp Feature: domain Description: LomR Location: 2019-2730 bp Feature: domain Description: LomR Location: 201 9-2730 bp Feature: gene Location: 3263-3931 bp Feature: domain Description: PHA02518 Location: 3272-3869 bp Feature: domain Description: PHA0251 8 Location: 3272-3869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), LomR (COG3637), PHA02518 (ParA-like protein; Provisional)

Seq: AJPV01000558.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold77.contig3, whole genome shotgun sequence (5525 bp)
Overview 1 RT 1: 3-2006 bp Neighborhood of RT #1 [3, 2006] RVT-GII RVT-GII Feature: gene Location: 3-128 bp Feature: gene Location: 192-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210-573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 10-573 bp Feature: gene Location: 911-1183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1172 bp Feature: gene Location: 1305-1607 bp Feature: gene Location: 1677-2006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJPV01000663.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold145, whole genome shotgun sequence (4323 bp)
Overview 1 RT 1: 3-3197 bp Neighborhood of RT #1 [3, 3223] RVT-GII Porin_2 Feature: gene Location: 3-356 bp Feature: gene Location: 505-651 bp Feature: gene Location: 786-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-972 bp Feature: gene Location: 1161-1382 bp Feature: gene Location: 1691-3223 bp Feature: domain Description: Porin_2 Location: 1763-3197 bp Feature: domain Description: Porin_2 Location: 1763 -3 197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Porin_2 (pfam02530)

Seq: AJPV01000673.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold154, whole genome shotgun sequence (3612 bp)
Overview 1 RT 1: 503-3438 bp Neighborhood of RT #1 [503, 3512] PepP RVT-GII GIIM Feature: gene Location: 503-697 bp Feature: gene Location: 817-1824 bp Feature: domain Description: PepP Location: 967-1789 bp Feature: domain Description: PepP Location: 967-1789 bp Feature: gene Location: 2907-3512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2916-3132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2916-3132 bp Feature: domain Description: GIIM Note: maturase Location: 3213-3438 bp Feature: domain Description: GIIM Note: maturase Location: 3213-34 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepP (COG0006), RVT-GII, GIIM (pfam08388)

Seq: AJPV01000687.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold165, whole genome shotgun sequence (1985 bp)
Overview 1 RT 1: 40-1737 bp Neighborhood of RT #1 [40, 1844] RVT-GII GIIM Feature: gene Location: 40-231 bp Feature: gene Location: 516-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1542-1737 bp Feature: domain Description: GIIM Note: maturase Location: 15 42-1737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPV01000692.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold169, whole genome shotgun sequence (1891 bp)
Overview 1 RT 1: 217-1718 bp Neighborhood of RT #1 [217, 1813] RVT-GII GIIM Feature: gene Location: 217-345 bp Feature: gene Location: 560-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76 7-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPV01000694.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold171, whole genome shotgun sequence (1843 bp)
Overview 1 RT 1: 3-1652 bp Neighborhood of RT #1 [3, 1732] RVT-GII GIIM Feature: gene Location: 3-158 bp Feature: gene Location: 285-425 bp Feature: gene Location: 431-1732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1343 bp Feature: domain Description: GIIM Note: maturase Location: 1424-1652 bp Feature: domain Description: GIIM Note: maturase Location: 1424-1652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPV01000699.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold176, whole genome shotgun sequence (1694 bp)
Overview 1 RT 1: 85-1693 bp Neighborhood of RT #1 [85, 1693] RVT-GII Feature: gene Location: 85-1521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1337-1693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJPV01000707.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold184, whole genome shotgun sequence (1518 bp)
Overview 1 RT 1: 2-1322 bp Neighborhood of RT #1 [2, 1483] RVT-GII GIIM Feature: gene Location: 2-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1052 bp Feature: domain Description: GIIM Note: maturase Location: 1103-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1103-1322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPV01000708.1 Bradyrhizobium elkanii CCBAU 05737 Scaffold185, whole genome shotgun sequence (1517 bp)
Overview 1 RT 1: 106-1312 bp Neighborhood of RT #1 [106, 1482] RVT-GII GIIM Feature: gene Location: 106-1482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-10 51 bp Feature: domain Description: GIIM Note: maturase Location: 1102-1312 bp Feature: domain Description: GIIM Note: maturase Location: 110 2-1312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)