myRT

myRT report for GCA_000261585.1_15618

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Seq: AJPZ01000465.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold53, whole genome shotgun sequence (57014 bp)
Overview 1 RT 1: 5867-9345 bp Neighborhood of RT #1 [5867, 9345] Tra5 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 5867-6739 bp Feature: domain Description: Tra5 Location: 5909-6617 bp Feature: domain Description: Tra5 Location: 5909-661 7 bp Feature: gene Location: 6717-7022 bp Feature: domain Description: HTH_Tnp_1 Location: 6774-6981 bp Feature: domain Description: HTH_Tnp_1 Location: 6774-6981 bp Feature: gene Location: 7148-8446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7403-8060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7403-8060 bp Feature: domain Description: GIIM Note: maturase Location: 8138-8366 bp Feature: domain Description: GIIM Note: maturase Location: 81 38-8366 bp Feature: gene Location: 8452-8592 bp Feature: gene Location: 9211-9345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: AJPZ01000505.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold73, whole genome shotgun sequence (23077 bp)
Overview 1 RT 1: 3-2959 bp Neighborhood of RT #1 [3, 2959] RVT-GII RVT-GII group_II_RT_mat Feature: gene Location: 3-413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-2 61 bp Feature: gene Location: 555-857 bp Feature: gene Location: 1094-1441 bp Feature: gene Location: 1474-2163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801-2122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801-2 12 2 bp Feature: gene Location: 2212-2742 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2221-2635 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 2 2 1-2 635 bp Feature: gene Location: 2813-2959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: AJPZ01000528.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold89.contig2, whole genome shotgun sequence (8635 bp)
Overview 1 RT 1: 2102-4959 bp Neighborhood of RT #1 [2102, 4959] RVT-GII GIIM Feature: gene Location: 2102-2314 bp Feature: gene Location: 2524-2925 bp Feature: gene Location: 2947-4176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3148-3805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 148-3 805 bp Feature: domain Description: GIIM Note: maturase Location: 3880-4084 bp Feature: domain Description: GIIM Note: maturase Location: 3 880-4084 bp Feature: gene Location: 4400-4630 bp Feature: gene Location: 4768-4959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPZ01000561.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold114, whole genome shotgun sequence (7353 bp)
Overview 1 RT 1: 3607-7334 bp Neighborhood of RT #1 [3607, 7351] PHA02518 LomR RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3607-4275 bp Feature: domain Description: PHA02518 Location: 3616-4213 bp Feature: domain Description: PHA02518 Location: 3616-4 213 bp Feature: gene Location: 4719-5555 bp Feature: domain Description: LomR Location: 4755-5466 bp Feature: domain Description: LomR Location: 4 755-54 66 bp Feature: gene Location: 5842-6819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5848-6445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584 8-64 4 5 bp Feature: domain Description: GIIM Note: maturase Location: 6511-6733 bp Feature: domain Description: GIIM Note: maturase Location: 6511-6733 bp Feature: gene Location: 6968-7351 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7016-7334 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7016-7334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02518 (ParA-like protein; Provisional), LomR (COG3637), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: AJPZ01000678.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold217, whole genome shotgun sequence (644 bp)
Overview 1 RT 1: 82-472 bp Neighborhood of RT #1 [82, 642] RVT-GII GIIM Feature: gene Location: 82-642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-211 bp Feature: domain Description: GIIM Note: maturase Location: 262-472 bp Feature: domain Description: GIIM Note: maturase Location: 262-472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJPZ01000689.1 Bradyrhizobium japonicum CCBAU 15618 Scaffold228, whole genome shotgun sequence (513 bp)
Overview 1 RT 1: 1-511 bp Neighborhood of RT #1 [1, 510] RVT-GII Feature: gene Location: 1-510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII