myRT

myRT report for GCA_000261605.1_25435

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Seq: AJQA01000362.1 Bradyrhizobium japonicum CCBAU 25435 Scaffold25.contig1, whole genome shotgun sequence (62505 bp)
Overview 1 RT 1: 41-3519 bp Neighborhood of RT #1 [41, 3519] Tra5 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 41-913 bp Feature: domain Description: Tra5 Location: 83-791 bp Feature: domain Description: Tra5 Location: 83-791 bp Feature: gene Location: 891-1196 bp Feature: domain Description: HTH_Tnp_1 Location: 948-1155 bp Feature: domain Description: HTH_Tnp_1 Location: 948-1 1 55 bp Feature: gene Location: 1322-2620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577-2234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 577-2234 bp Feature: domain Description: GIIM Note: maturase Location: 2312-2540 bp Feature: domain Description: GIIM Note: maturase Location: 231 2-2540 bp Feature: gene Location: 2626-2766 bp Feature: gene Location: 3385-3519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: AJQA01000403.1 Bradyrhizobium japonicum CCBAU 25435 Scaffold46, whole genome shotgun sequence (22881 bp)
Overview 1 RT 1: 17416-22725 bp Neighborhood of RT #1 [17416, 22880] RVT-GII RVT-GII Feature: gene Location: 17416-19731 bp Feature: gene Location: 19807-19953 bp Feature: gene Location: 20024-21406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20351-21041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0351-2 1041 bp Feature: gene Location: 21768-21983 bp Feature: gene Location: 22023-22325 bp Feature: gene Location: 22467-22880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22629-22725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 62 9-2 2 72 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJQA01000417.1 Bradyrhizobium japonicum CCBAU 25435 Scaffold56, whole genome shotgun sequence (13950 bp)
Overview 1 RT 1: 7415-10272 bp Neighborhood of RT #1 [7415, 10272] RVT-GII GIIM Feature: gene Location: 7415-7627 bp Feature: gene Location: 7837-8238 bp Feature: gene Location: 8260-9489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8461-9118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8461-9118 bp Feature: domain Description: GIIM Note: maturase Location: 9193-9397 bp Feature: domain Description: GIIM Note: maturase Location: 9193 -93 97 bp Feature: gene Location: 9713-9943 bp Feature: gene Location: 10081-10272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)