myRT

myRT report for GCA_000261705.1_15544

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Seq: AJQF01000486.1 Bradyrhizobium sp. CCBAU 15544 Scaffold59, whole genome shotgun sequence (37687 bp)
Overview 1 RT 1: 34166-37518 bp Neighborhood of RT #1 [34166, 37559] RVT-GII GIIM HTH_Tnp_1 Feature: gene Location: 34166-34372 bp Feature: gene Location: 34928-35062 bp Feature: gene Location: 35827-37128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36085-36742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36085-36742 bp Feature: domain Description: GIIM Note: maturase Location: 36820-37048 bp Feature: domain Description: GIIM Note: maturase Location: 36820-37048 bp Feature: gene Location: 37254-37559 bp Feature: domain Description: HTH_Tnp_1 Location: 37311-37518 bp Feature: domain Description: HTH_Tnp_1 Location: 3731 1 -3751 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527)

Seq: AJQF01000509.1 Bradyrhizobium sp. CCBAU 15544 Scaffold67, whole genome shotgun sequence (26045 bp)
Overview 1 RT 1: 20585-25494 bp Neighborhood of RT #1 [20585, 25494] RVT-GII Feature: gene Location: 20585-22900 bp Feature: gene Location: 22976-23122 bp Feature: gene Location: 23193-24575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23520-24210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 352 0-2 42 10 bp Feature: gene Location: 24937-25152 bp Feature: gene Location: 25192-25494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJQF01000510.1 Bradyrhizobium sp. CCBAU 15544 Scaffold68, whole genome shotgun sequence (24825 bp)
Overview 1 RT 1: 16831-21247 bp Neighborhood of RT #1 [16831, 21309] DDE_Tnp_IS66 RVT-GII GIIM LomR PHA02518 Feature: gene Location: 16831-17007 bp Feature: gene Location: 17135-17860 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17153-17588 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17153 -17588 bp Feature: gene Location: 18097-19425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18388-19051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 88-19051 bp Feature: domain Description: GIIM Note: maturase Location: 19117-19339 bp Feature: domain Description: GIIM Note: maturase Location: 19117-193 3 9 bp Feature: gene Location: 19361-20197 bp Feature: domain Description: LomR Location: 19397-20108 bp Feature: domain Description: LomR Location: 193 97-20108 bp Feature: gene Location: 20641-21309 bp Feature: domain Description: PHA02518 Location: 20650-21247 bp Feature: domain Description: PHA02518 Location: 20650-21247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), LomR (COG3637), PHA02518 (ParA-like protein; Provisional)

Seq: AJQF01000528.1 Bradyrhizobium sp. CCBAU 15544 Scaffold80.contig2, whole genome shotgun sequence (8632 bp)
Overview 1 RT 1: 2102-4958 bp Neighborhood of RT #1 [2102, 4958] RVT-GII GIIM Feature: gene Location: 2102-2314 bp Feature: gene Location: 2523-2924 bp Feature: gene Location: 2946-4175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147-3804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314 7-3804 bp Feature: domain Description: GIIM Note: maturase Location: 3879-4083 bp Feature: domain Description: GIIM Note: maturase Location: 3879-4 083 bp Feature: gene Location: 4399-4629 bp Feature: gene Location: 4767-4958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJQF01000592.1 Bradyrhizobium sp. CCBAU 15544 Scaffold136, whole genome shotgun sequence (1165 bp)
Overview 1 RT 1: 2-914 bp Neighborhood of RT #1 [2, 1084] RVT-GII GIIM Feature: gene Location: 2-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35-653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 -65 3 bp Feature: domain Description: GIIM Note: maturase Location: 704-914 bp Feature: domain Description: GIIM Note: maturase Location: 704-914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJQF01000605.1 Bradyrhizobium sp. CCBAU 15544 Scaffold149, whole genome shotgun sequence (822 bp)
Overview 1 RT 1: 3-351 bp Neighborhood of RT #1 [3, 728] RVT-GII Feature: gene Location: 3-728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII