myRT

myRT report for GCA_000261765.1_41267

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Seq: AJQI01000420.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold34.contig1, whole genome shotgun sequence (13822 bp)
Overview 1 RT 1: 5764-9242 bp Neighborhood of RT #1 [5764, 9242] Tra5 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 5764-6636 bp Feature: domain Description: Tra5 Location: 5806-6514 bp Feature: domain Description: Tra5 Location: 5806-651 4 bp Feature: gene Location: 6614-6919 bp Feature: domain Description: HTH_Tnp_1 Location: 6671-6878 bp Feature: domain Description: HTH_Tnp_1 Location: 6671 -6878 bp Feature: gene Location: 7045-8343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7300-7957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7300-7957 bp Feature: domain Description: GIIM Note: maturase Location: 8035-8263 bp Feature: domain Description: GIIM Note: maturase Location: 8035-8263 bp Feature: gene Location: 8349-8489 bp Feature: gene Location: 9108-9242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: AJQI01000457.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold51.contig1, whole genome shotgun sequence (12651 bp)
Overview 1 RT 1: 3-3423 bp Neighborhood of RT #1 [3, 3423] RVT-GII Feature: gene Location: 3-347 bp Feature: gene Location: 234-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240-450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 40-450 bp Feature: gene Location: 886-1032 bp Feature: gene Location: 1108-3423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJQI01000463.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold54, whole genome shotgun sequence (22306 bp)
Overview 1 RT 1: 14326-18742 bp Neighborhood of RT #1 [14326, 18804] DDE_Tnp_IS66 RVT-GII GIIM LomR PHA02518 Feature: gene Location: 14326-14502 bp Feature: gene Location: 14630-15355 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14648-15083 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14648-15083 bp Feature: gene Location: 15592-16920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15883-16546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15883 -16546 bp Feature: domain Description: GIIM Note: maturase Location: 16612-16834 bp Feature: domain Description: GIIM Note: maturase Location: 16612-1683 4 bp Feature: gene Location: 16856-17692 bp Feature: domain Description: LomR Location: 16892-17603 bp Feature: domain Description: LomR Location: 16892-17603 bp Feature: gene Location: 18136-18804 bp Feature: domain Description: PHA02518 Location: 18145-18742 bp Feature: domain Description: PHA02518 Location: 18145-18742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), LomR (COG3637), PHA02518 (ParA-like protein; Provisional)

Seq: AJQI01000488.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold71, whole genome shotgun sequence (11213 bp)
Overview 1 RT 1: 7398-10255 bp Neighborhood of RT #1 [7398, 10255] RVT-GII GIIM Feature: gene Location: 7398-7610 bp Feature: gene Location: 7820-8221 bp Feature: gene Location: 8243-9472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8444-9101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 4 4 -9101 bp Feature: domain Description: GIIM Note: maturase Location: 9176-9380 bp Feature: domain Description: GIIM Note: maturase Location: 9176-9380 bp Feature: gene Location: 9696-9926 bp Feature: gene Location: 10064-10255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJQI01000523.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold103, whole genome shotgun sequence (2193 bp)
Overview 1 RT 1: 1459-2179 bp Neighborhood of RT #1 [1459, 2181] RVT-GII Feature: gene Location: 1459-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786-2179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786-2179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJQI01000529.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold109.contig1, whole genome shotgun sequence (433 bp)
Overview 1 RT 1: 13-430 bp Neighborhood of RT #1 [13, 432] RVT-GII Feature: gene Location: 13-432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AJQI01000546.1 Bradyrhizobium diazoefficiens strain CCBAU 41267 Scaffold124.contig2, whole genome shotgun sequence (847 bp)
Overview 1 RT 1: 2-601 bp Neighborhood of RT #1 [2, 657] RVT-GII RVT-GII Feature: gene Location: 2-346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-335 bp Feature: gene Location: 307-657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII