myRT

myRT report for GCA_000261785.1_05623

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Seq: AJQJ01000447.1 Bradyrhizobium yuanmingense CCBAU 05623 Scaffold46, whole genome shotgun sequence (30223 bp)
Overview 1 RT 1: 329-3274 bp 2 RT 2: 8955-13433 bp Neighborhood of RT #1 [329, 3274] RVT-GII RVT-GII DDE_Tnp_1_4 Neighborhood of RT #2 [8955, 13433] PHA02518 LomR RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 329-658 bp Feature: gene Location: 728-1018 bp Feature: gene Location: 1152-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 55-1 41 3 bp Feature: gene Location: 1385-2143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 403-1 766 bp Feature: gene Location: 2242-2697 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2278-2452 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 2278-2452 bp Feature: gene Location: 2870-3274 bp Feature: gene Location: 8955-9623 bp Feature: domain Description: PHA02518 Location: 8964-9561 bp Feature: domain Description: PHA0251 8 Location: 8964-9561 bp Feature: gene Location: 10067-10903 bp Feature: domain Description: LomR Location: 10103-10814 bp Feature: domain Description: LomR Location: 1 01 03-1 081 4 bp Feature: gene Location: 11190-12167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11196-11793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 96-1 1 793 bp Feature: domain Description: GIIM Note: maturase Location: 11859-12081 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 859-1 2081 bp Feature: gene Location: 12404-13129 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12422-12857 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2422-1 2857 bp Feature: gene Location: 13257-13433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_4 (pfam13701), LomR (COG3637), GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PHA02518 (ParA-like protein; Provisional)

Seq: AJQJ01000454.1 Bradyrhizobium yuanmingense CCBAU 05623 Scaffold52, whole genome shotgun sequence (28080 bp)
Overview 1 RT 1: 22588-26112 bp Neighborhood of RT #1 [22588, 26138] COG3436 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 22588-23199 bp Feature: domain Description: COG3436 Location: 22852-23167 bp Feature: domain Description: COG3436 Location: 2 2 852 -2 3167 bp Feature: gene Location: 23453-23764 bp Feature: gene Location: 23664-24905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23865-24549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3865-2 4549 bp Feature: gene Location: 25156-25752 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25591-25717 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 5591-2 5717 bp Feature: gene Location: 25761-26138 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25776-25977 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 5776-2 5977 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 25998-26112 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 5998-2 6112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: AJQJ01000547.1 Bradyrhizobium yuanmingense CCBAU 05623 Scaffold121, whole genome shotgun sequence (1168 bp)
Overview 1 RT 1: 2-917 bp Neighborhood of RT #1 [2, 1087] RVT-GII GIIM Feature: gene Location: 2-1087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8-656 bp Feature: domain Description: GIIM Note: maturase Location: 707-917 bp Feature: domain Description: GIIM Note: maturase Location: 707-917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)