myRT

myRT report for GCA_000261845.1_05557

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Seq: AJQM01000292.1 Sinorhizobium fredii CCBAU 05557 Scaffold83.contig1, whole genome shotgun sequence (7205 bp)
Overview 1 RT 1: 1318-6228 bp Neighborhood of RT #1 [1318, 6233] HTH_Tnp_1 HTH_21 RVT-GII RVT-GII COG4644 Feature: gene Location: 1318-1668 bp Feature: domain Description: HTH_Tnp_1 Location: 1321-1543 bp Feature: domain Description: HTH_Tnp_1 Location: 1 321 -1 543 bp Feature: gene Location: 1740-1973 bp Feature: domain Description: HTH_21 Location: 1749-1854 bp Feature: domain Description: HTH_21 Location: 1 749-1 854 bp Feature: gene Location: 2164-3489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2419-3109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 9-31 09 bp Feature: gene Location: 3821-3994 bp Feature: gene Location: 4282-5052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4288-4897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4288-4897 bp Feature: gene Location: 5058-5903 bp Feature: gene Location: 5904-6233 bp Feature: domain Description: COG4644 Location: 5919-6228 bp Feature: domain Description: COG4644 Location: 591 9-6228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_21 (pfam13276), RVT-GII, COG4644 (Transposase and inactivated derivatives, TnpA family )