myRT

myRT report for GCA_000261905.1_83622

Download annotations/find similar RTs

Seq: AJQP01000252.1 Sinorhizobium fredii CCBAU 83622 Scaffold83, whole genome shotgun sequence (11342 bp)
Overview 1 RT 1: 70-2454 bp Neighborhood of RT #1 [70, 2454] RVT-GII Y2_Tnp Feature: gene Location: 70-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-589 bp Feature: gene Location: 1027-1443 bp Feature: domain Description: Y2_Tnp Location: 1156-1249 bp Feature: domain Description: Y2_Tnp Location: 1 1 56-1 249 bp Feature: gene Location: 2047-2454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y2_Tnp (pfam04986), RVT-GII

Seq: AJQP01000274.1 Sinorhizobium fredii CCBAU 83622 Scaffold101, whole genome shotgun sequence (8039 bp)
Overview 1 RT 1: 1787-6577 bp Neighborhood of RT #1 [1787, 6702] COG4644 RVT-GII RVT-GII HTH_21 HTH_Tnp_1 Feature: gene Location: 1787-2116 bp Feature: domain Description: COG4644 Location: 1802-2111 bp Feature: domain Description: COG4644 Location: 1802 -2 111 bp Feature: gene Location: 2117-2962 bp Feature: gene Location: 2968-3738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2974-3583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 974-3583 bp Feature: gene Location: 4026-4199 bp Feature: gene Location: 4531-5856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4786-5476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4786-5476 bp Feature: gene Location: 6047-6280 bp Feature: domain Description: HTH_21 Location: 6056-6161 bp Feature: domain Description: HTH_2 1 Location: 6056-6161 bp Feature: gene Location: 6352-6702 bp Feature: domain Description: HTH_Tnp_1 Location: 6355-6577 bp Feature: domain Description: HTH_Tnp_1 Location: 6355-6577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4644 (Transposase and inactivated derivatives, TnpA family ), RVT-GII, HTH_21 (pfam13276), HTH_Tnp_1 (pfam01527)