myRT

myRT report for GCA_000261965.1_83753

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Seq: AJQS01000282.1 Sinorhizobium fredii CCBAU 83753 Scaffold87, whole genome shotgun sequence (11323 bp)
Overview 1 RT 1: 73-2457 bp Neighborhood of RT #1 [73, 2457] RVT-GII Y2_Tnp Feature: gene Location: 73-954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-592 bp Feature: gene Location: 1030-1446 bp Feature: domain Description: Y2_Tnp Location: 1159-1252 bp Feature: domain Description: Y2_Tnp Location: 1 1 59-1 252 bp Feature: gene Location: 2050-2457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y2_Tnp (pfam04986), RVT-GII

Seq: AJQS01000300.1 Sinorhizobium fredii CCBAU 83753 Scaffold101, whole genome shotgun sequence (7995 bp)
Overview 1 RT 1: 1765-6555 bp Neighborhood of RT #1 [1765, 6680] COG4644 RVT-GII RVT-GII HTH_21 HTH_Tnp_1 Feature: gene Location: 1765-2094 bp Feature: domain Description: COG4644 Location: 1780-2089 bp Feature: domain Description: COG4644 Location: 1780-2 089 bp Feature: gene Location: 2095-2940 bp Feature: gene Location: 2946-3716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952-3561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 952 -3561 bp Feature: gene Location: 4004-4177 bp Feature: gene Location: 4509-5834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4764-5454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4764-5454 bp Feature: gene Location: 6025-6258 bp Feature: domain Description: HTH_21 Location: 6034-6139 bp Feature: domain Description: HTH_2 1 Location: 6034-6139 bp Feature: gene Location: 6330-6680 bp Feature: domain Description: HTH_Tnp_1 Location: 6333-6555 bp Feature: domain Description: HTH_Tnp_1 Location: 6333-6555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4644 (Transposase and inactivated derivatives, TnpA family ), RVT-GII, HTH_21 (pfam13276), HTH_Tnp_1 (pfam01527)

Seq: AJQS01000366.1 Sinorhizobium fredii CCBAU 83753 Scaffold155.contig2, whole genome shotgun sequence (1147 bp)
Overview 1 RT 1: 3-975 bp Neighborhood of RT #1 [3, 1061] RVT-GII GIIM Feature: gene Location: 3-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-663 bp Feature: domain Description: GIIM Note: maturase Location: 744-975 bp Feature: domain Description: GIIM Note: maturase Location: 744-975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)