myRT

myRT report for GCA_000262005.1_ASM26200v1

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Seq: AHGZ01000057.1 Pseudomonas monteilii QM contig057, whole genome shotgun sequence (24411 bp)
Overview 1 RT 1: 21474-24410 bp Neighborhood of RT #1 [21474, 24410] RVT-GII GIIM Feature: gene Location: 21474-21653 bp Feature: gene Location: 21837-22235 bp Feature: gene Location: 22385-23653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22598-23255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22598-23255 bp Feature: domain Description: GIIM Note: maturase Location: 23333-23555 bp Feature: domain Description: GIIM Note: maturase Location: 23333-23555 bp Feature: gene Location: 24216-24410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AHGZ01000119.1 Pseudomonas monteilii QM contig119, whole genome shotgun sequence (36976 bp)
Overview 1 RT 1: 10824-17286 bp Neighborhood of RT #1 [10824, 17303] groES groEL RVT_N RVT-GII GIIM HNHc COG3907 OmpR Feature: gene Location: 10824-11117 bp Feature: domain Description: groES Location: 10827-11112 bp Feature: domain Description: groES Location: 1082 7-11112 bp Feature: gene Location: 11166-12806 bp Feature: domain Description: groEL Location: 11172-12789 bp Feature: domain Description: groEL Location: 11172 -12 789 bp Feature: gene Location: 13841-15532 bp Feature: domain Description: RVT_N Location: 13895-14135 bp Feature: domain Description: RVT_N Location: 13895-14135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14183-14828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14183-1482 8 bp Feature: domain Description: GIIM Note: maturase Location: 14879-15113 bp Feature: domain Description: GIIM Note: maturase Location: 14879-15113 bp Feature: domain Description: HNHc Note: nucleases Location: 15332-15485 bp Feature: domain Description: HNHc Note: nucleases Location: 15332 -15485 bp Feature: gene Location: 15708-16436 bp Feature: domain Description: COG3907 Location: 15726-16398 bp Feature: domain Description: COG3907 Location: 1572 6-16398 bp Feature: gene Location: 16620-17303 bp Feature: domain Description: OmpR Location: 16623-17286 bp Feature: domain Description: OmpR Location: 1662 3-172 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG3907 (Membrane-associated enzyme, PAP2 (acid phosphatase) superfamily ), OmpR (COG0745)

Seq: AHGZ01000120.1 Pseudomonas monteilii QM contig120, whole genome shotgun sequence (83728 bp)
Overview 1 RT 1: 79312-83516 bp Neighborhood of RT #1 [79312, 83516] RVT-UG17 SLATT_5 Feature: gene Location: 79312-79725 bp Feature: gene Location: 79755-80669 bp Feature: gene Location: 80944-82308 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 81172-81775 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 81172-81775 bp Feature: gene Location: 82305-82868 bp Feature: domain Description: SLATT_5 Location: 82314-82836 bp Feature: domain Description: SLATT_5 Location: 823 14-8283 6 bp Feature: gene Location: 83061-83516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)