myRT

myRT report for GCA_000262065.3_KF707_a1

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Seq: AJMR01000184.1 Pseudomonas furukawaii strain KF707 ctg1632, whole genome shotgun sequence (3842 bp)
Overview 1 RT 1: 72-3183 bp Neighborhood of RT #1 [72, 3183] RVT-GII GIIM Feature: gene Location: 72-1439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1 020 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1305 bp Feature: domain Description: GIIM Note: maturase Location: 1 077-1 305 bp Feature: gene Location: 1957-3183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJMR01000228.1 Pseudomonas furukawaii strain KF707 ctg10006, whole genome shotgun sequence (597931 bp)
Overview 1 RT 1: 254602-262099 bp Neighborhood of RT #1 [254602, 262107] PRK10791 COG3293 RVT_N RVT-GII GIIM COG3293 PRK05347 cysS Feature: gene Location: 254602-255096 bp Feature: domain Description: PRK10791 Location: 254605-255094 bp Feature: domain Description: PRK10791 Location: 2 54605-2 55094 bp Feature: gene Location: 255692-256168 bp Feature: domain Description: COG3293 Location: 255722-256130 bp Feature: domain Description: COG32 93 Location: 2 5572 2 -2 56130 bp Feature: gene Location: 256177-257661 bp Feature: RT Description: RVT_N Location: 256231-256474 bp Feature: RT Description: RVT_N Location: 2 562 31-2 56474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256519-257155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56519-2 57155 bp Feature: domain Description: GIIM Note: maturase Location: 257218-257422 bp Feature: domain Description: GIIM Note: maturase Location: 2 572 18-2 5742 2 bp Feature: domain Description: COG3293 Location: 257422-257638 bp Feature: domain Description: COG32 93 Location: 2 5742 2 -2 57638 bp Feature: gene Location: 259055-260722 bp Feature: domain Description: PRK05347 Location: 259070-260717 bp Feature: domain Description: PRK05347 Location: 2 59070-2 60717 bp Feature: gene Location: 260719-262107 bp Feature: domain Description: cysS Location: 260725-262099 bp Feature: domain Description: cysS Location: 2 6072 5-2 62 099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10791 (peptidylprolyl isomerase B), COG3293 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK05347 (glutaminyl-tRNA synthetase; Provisional), cysS (TIGR00435)

Seq: AJMR01000224.1 Pseudomonas furukawaii strain KF707 ctg10002, whole genome shotgun sequence (238238 bp)
Overview 1 RT 1: 163833-171047 bp Neighborhood of RT #1 [163833, 171106] PRK10416 RVT_N RVT-GII YkfC HNHc PqqL PqqL Feature: gene Location: 163833-165203 bp Feature: domain Description: PRK10416 Location: 164118-165192 bp Feature: domain Description: PRK10416 Location: 164118-165192 bp Feature: gene Location: 165243-165359 bp Feature: gene Location: 165411-167144 bp Feature: RT Description: RVT_N Location: 165471-165711 bp Feature: RT Description: RVT_N Location: 165471-165711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165762-166410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165762-166410 bp Feature: domain Description: YkfC Location: 166566-166791 bp Feature: domain Description: YkfC Location: 166566-166791 bp Feature: domain Description: HNHc Note: nucleases Location: 166947-167103 bp Feature: domain Description: HNHc Note: nucleases Location: 166947-167103 bp Feature: gene Location: 168271-169626 bp Feature: domain Description: PqqL Location: 168337-169612 bp Feature: domain Description: PqqL Location: 1683 3 7-169612 bp Feature: gene Location: 169619-171106 bp Feature: domain Description: PqqL Location: 169808-171047 bp Feature: domain Description: PqqL Location: 169808-171047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10416 (signal recognition particle-docking protein FtsY; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PqqL (COG0612)

Seq: AJMR01000153.1 Pseudomonas furukawaii strain KF707 ctg1603, whole genome shotgun sequence (7929 bp)
Overview 1 RT 1: 1332-7311 bp Neighborhood of RT #1 [1332, 7445] cysS PRK05347 RVT_N RVT-GII GIIM DUF4096 Feature: gene Location: 1332-2720 bp Feature: domain Description: cysS Location: 1338-2712 bp Feature: domain Description: cysS Location: 1338-2712 bp Feature: gene Location: 2717-4384 bp Feature: domain Description: PRK05347 Location: 2732-4379 bp Feature: domain Description: PRK0534 7 Location: 2732-4 379 bp Feature: gene Location: 5778-7046 bp Feature: RT Description: RVT_N Location: 5832-6075 bp Feature: RT Description: RVT_N Location: 5832-6075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6120-6756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6120-6756 bp Feature: domain Description: GIIM Note: maturase Location: 6819-7020 bp Feature: domain Description: GIIM Note: maturase Location: 6819-7020 bp Feature: gene Location: 7077-7445 bp Feature: domain Description: DUF4096 Location: 7098-7311 bp Feature: domain Description: DUF4 096 Location: 7098-7311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), PRK05347 (glutaminyl-tRNA synthetase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4096 (pfam13340)

Seq: AJMR01000119.1 Pseudomonas furukawaii strain KF707 ctg1721, whole genome shotgun sequence (26177 bp)
Overview 1 RT 1: 2208-8481 bp Neighborhood of RT #1 [2208, 8483] DDE_Tnp_IS66_C InsE RVT_N RVT-GII GIIM IS5 Toluene_X Feature: gene Location: 2208-2342 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2214-2325 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2214-2325 bp Feature: gene Location: 3421-3729 bp Feature: domain Description: InsE Location: 3436-3721 bp Feature: domain Description: InsE Location: 3436-3721 bp Feature: gene Location: 4760-6265 bp Feature: RT Description: RVT_N Location: 4841-5066 bp Feature: RT Description: RVT_N Location: 4841-5 066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5117-5759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 117-5 75 9 bp Feature: domain Description: GIIM Note: maturase Location: 5810-6044 bp Feature: domain Description: GIIM Note: maturase Location: 5 810-6044 bp Feature: gene Location: 6407-6796 bp Feature: domain Description: IS5 Location: 6413-6770 bp Feature: domain Description: IS5 Location: 6413-6770 bp Feature: gene Location: 7110-8483 bp Feature: domain Description: Toluene_X Location: 7161-8481 bp Feature: domain Description: Toluene_X Location: 7161-8481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), IS5 (COG3039), Toluene_X (pfam03349)

Seq: AJMR01000193.1 Pseudomonas furukawaii strain KF707 ctg1735, whole genome shotgun sequence (2998 bp)
Overview 1 RT 1: 1253-2486 bp Neighborhood of RT #1 [1253, 2620] RVT-GII GIIM Feature: gene Location: 1253-2620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1586-2201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1586 -2201 bp Feature: domain Description: GIIM Note: maturase Location: 2258-2486 bp Feature: domain Description: GIIM Note: maturase Location: 2258-2486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJMR01000185.1 Pseudomonas furukawaii strain KF707 ctg1633, whole genome shotgun sequence (31099 bp)
Overview 1 RT 1: 72-4524 bp Neighborhood of RT #1 [72, 4544] RVT-GII GIIM SDR_c PRK07656 Feature: gene Location: 72-1439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1305 bp Feature: domain Description: GIIM Note: maturase Location: 107 7 -1305 bp Feature: gene Location: 2133-2906 bp Feature: domain Description: SDR_c Location: 2160-2862 bp Feature: domain Description: SDR_c Location: 2160-2862 bp Feature: gene Location: 2970-4544 bp Feature: domain Description: PRK07656 Location: 2991-4524 bp Feature: domain Description: PRK07 656 Location: 2991-4524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_c (cd05233), PRK07656 (long-chain-fatty-acid--CoA ligase; Validated), RVT-GII, GIIM (pfam08388)

Seq: AJMR01000042.1 Pseudomonas furukawaii strain KF707 ctg1695, whole genome shotgun sequence (39087 bp)
Overview 1 RT 1: 34484-38882 bp Neighborhood of RT #1 [34484, 39016] galactar-dH20 HPPR RVT-GII GIIM Feature: gene Location: 34484-36040 bp Feature: domain Description: galactar-dH20 Location: 34520-36038 bp Feature: domain Description: galactar-dH20 Location: 34520-36038 bp Feature: gene Location: 36089-37006 bp Feature: domain Description: HPPR Location: 36095-36974 bp Feature: domain Description: HPPR Location: 36095-36974 bp Feature: gene Location: 37649-39016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37982-38597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3798 2-38 597 bp Feature: domain Description: GIIM Note: maturase Location: 38654-38882 bp Feature: domain Description: GIIM Note: maturase Location: 38 654-38 8 8 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT galactar-dH20 (TIGR03248), HPPR (cd12156), RVT-GII, GIIM (pfam08388)

Seq: AJMR01000187.1 Pseudomonas furukawaii strain KF707 ctg1635, whole genome shotgun sequence (16347 bp)
Overview 1 RT 1: 72-3223 bp Neighborhood of RT #1 [72, 3303] RVT-GII GIIM LysR Feature: gene Location: 72-1439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1305 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1305 bp Feature: gene Location: 2045-2248 bp Feature: gene Location: 2338-3303 bp Feature: domain Description: LysR Location: 2347-3223 bp Feature: domain Description: LysR Location: 2347-3223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: AJMR01000230.1 Pseudomonas furukawaii strain KF707 ctg10008, whole genome shotgun sequence (173025 bp)
Overview 1 RT 1: 169545-172820 bp Neighborhood of RT #1 [169545, 172954] ScpA ScpB RVT-GII GIIM Feature: gene Location: 169545-170369 bp Feature: domain Description: ScpA Location: 169668-170364 bp Feature: domain Description: ScpA Location: 169668-170364 bp Feature: gene Location: 170370-171164 bp Feature: domain Description: ScpB Location: 170382-170907 bp Feature: domain Description: ScpB Location: 170382-170907 bp Feature: gene Location: 171587-172954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171920-172535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171920-172535 bp Feature: domain Description: GIIM Note: maturase Location: 172592-172820 bp Feature: domain Description: GIIM Note: maturase Location: 172592-172820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ScpA (COG1354), ScpB (COG1386), RVT-GII, GIIM (pfam08388)

Seq: AJMR01000018.1 Pseudomonas furukawaii strain KF707 ctg1543, whole genome shotgun sequence (46403 bp)
Overview 1 RT 1: 11785-17690 bp Neighborhood of RT #1 [11785, 17695] PucR PhyH RVT-GII GIIM CytC553 CytC553 Feature: gene Location: 11785-12792 bp Feature: domain Description: PucR Location: 11827-12766 bp Feature: domain Description: PucR Location: 11 827-12766 bp Feature: gene Location: 13416-14171 bp Feature: domain Description: PhyH Location: 13422-13977 bp Feature: domain Description: PhyH Location: 13422-13977 bp Feature: gene Location: 14448-15743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14709-15321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14709-15321 bp Feature: domain Description: GIIM Note: maturase Location: 15384-15597 bp Feature: domain Description: GIIM Note: maturase Location: 15384-15597 bp Feature: gene Location: 16341-16781 bp Feature: gene Location: 17039-17695 bp Feature: domain Description: CytC553 Location: 17159-17468 bp Feature: domain Description: CytC553 Location: 17159-17468 bp Feature: domain Description: CytC553 Location: 17474-17690 bp Feature: domain Description: CytC553 Location: 17474-17690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PucR (pfam07905), PhyH (pfam05721), RVT-GII, GIIM (pfam08388), CytC553 (COG2863)

Seq: AJMR01000188.1 Pseudomonas furukawaii strain KF707 ctg1637, whole genome shotgun sequence (2371 bp)
Overview 1 RT 1: 379-1612 bp Neighborhood of RT #1 [379, 1746] RVT-GII GIIM Feature: gene Location: 379-1746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 -1327 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1612 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJMR01000186.1 Pseudomonas furukawaii strain KF707 ctg1634, whole genome shotgun sequence (73535 bp)
Overview 1 RT 1: 72-4907 bp Neighborhood of RT #1 [72, 4912] RVT-GII GIIM HcaE FNR_iron_sulfur_binding_1 PRK07609 Feature: gene Location: 72-1439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1020 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1305 bp Feature: domain Description: GIIM Note: maturase Location: 1077-13 05 bp Feature: gene Location: 2159-3448 bp Feature: domain Description: HcaE Location: 2249-3407 bp Feature: domain Description: HcaE Location: 2249-3407 bp Feature: gene Location: 3812-4912 bp Feature: domain Description: FNR_iron_sulfur_binding_1 Location: 3875-4568 bp Feature: domain Description: FNR_iron_sulfur_binding_1 Location: 3875-4568 bp Feature: domain Description: PRK07609 Location: 4664-4907 bp Feature: domain Description: PRK07609 Location: 4664-4907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HcaE (COG4638), FNR_iron_sulfur_binding_1 (cd06215), PRK07609 (CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated), RVT-GII, GIIM (pfam08388)