myRT

myRT report for GCA_000262995.2_VRSA10_2

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Seq: AHBT01000001.1 Staphylococcus aureus subsp. aureus VRS10 supercont1.1, whole genome shotgun sequence (27805 bp)
Overview 1 RT 1: 870-7392 bp Neighborhood of RT #1 [870, 7418] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 870-1358 bp Feature: gene Location: 1438-2046 bp Feature: gene Location: 2587-3177 bp Ori: EIK35100.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3061-3160 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3061 -31 60 bp Feature: gene Location: 3264-4355 bp Ori: EIK35101.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3267-3447 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3267-3447 bp Feature: gene Location: 4709-5554 bp Ori: EIK35102.1 Feature: domain Description: PenP Location: 4721-5546 bp Feature: domain Description: PenP Location: 4721 -5546 bp Feature: gene Location: 5661-7418 bp Ori: EIK35103.1 Feature: domain Description: MecR1 Location: 5664-6693 bp Feature: domain Description: MecR1 Location: 5664-6693 bp Feature: domain Description: Transpeptidase Location: 6747-7392 bp Feature: domain Description: Transpeptidase Location: 6747-7392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: AHBT01000030.1 Staphylococcus aureus subsp. aureus VRS10 supercont1.30, whole genome shotgun sequence (205659 bp)
Overview 1 RT 1: 44342-49793 bp Neighborhood of RT #1 [44342, 49793] PRK08617 RVT-Retrons Feature: gene Location: 44342-46006 bp Ori: EIK28751.1 Feature: domain Description: PRK08617 Location: 44351-45998 bp Feature: domain Description: PRK08617 Location: 44351-45998 bp Feature: gene Location: 46358-46528 bp Feature: gene Location: 47256-48272 bp Ori: EIK28753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47406-47943 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47406-47943 bp Feature: gene Location: 48517-49146 bp Feature: gene Location: 49146-49793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: AHBT01000037.1 Staphylococcus aureus subsp. aureus VRS10 supercont1.37, whole genome shotgun sequence (46939 bp)
Overview 1 RT 1: 37206-42061 bp Neighborhood of RT #1 [37206, 42114] PinE PRK07726 RVT-GII HNHc InsE PHA02517 Feature: gene Location: 37206-37811 bp Ori: EIK27980.1 Feature: domain Description: PinE Location: 37212-37803 bp Feature: domain Description: PinE Location: 3 7212-3 7803 bp Feature: gene Location: 37837-38289 bp Ori: EIK27981.1 Feature: domain Description: PRK07726 Location: 37843-38254 bp Feature: domain Description: PRK07726 Location: 3 7843 -3 8254 bp Feature: gene Location: 38506-40392 bp Ori: EIK27982.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38821-39559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8821-3 9559 bp Feature: domain Description: HNHc Note: nucleases Location: 40111-40276 bp Feature: domain Description: HNHc Note: nucleases Location: 40111-40276 bp Feature: gene Location: 40952-41242 bp Ori: EIK27983.1 Feature: domain Description: InsE Location: 40955-41234 bp Feature: domain Description: InsE Location: 40955-4123 4 bp Feature: gene Location: 41278-42114 bp Ori: EIK27984.1 Feature: domain Description: PHA02517 Location: 41335-42061 bp Feature: domain Description: PHA02517 Location: 413 3 5-42061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)