myRT

myRT report for GCA_000263075.1_PAMC22718V0

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Seq: AJTK01000008.1 Pseudoalteromonas sp. PAMC 22718 ctg7180000011428, whole genome shotgun sequence (14286 bp)
Overview 1 RT 1: 2879-7040 bp Neighborhood of RT #1 [2879, 7040] Y1_Tnp Bac_DnaA_C RVT-Retrons Feature: gene Location: 2879-3232 bp Feature: gene Location: 3357-4331 bp Feature: domain Description: Y1_Tnp Location: 3390-3726 bp Feature: domain Description: Y1 _Tnp Location: 3390-3726 bp Feature: domain Description: Bac_DnaA_C Location: 4044-4308 bp Feature: domain Description: Bac_DnaA_C Location: 4044-4308 bp Feature: gene Location: 4553-5497 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4661-5249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4661 -5249 bp Feature: gene Location: 5494-6471 bp Feature: gene Location: 6834-7040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), Bac_DnaA_C (smart00760), RVT-Retrons

Seq: AJTK01000023.1 Pseudoalteromonas sp. PAMC 22718 ctg7180000011443, whole genome shotgun sequence (81798 bp)
Overview 1 RT 1: 10976-20694 bp Neighborhood of RT #1 [10976, 20702] RMtype1_S_Aco12261I-TRD1-CR1_like RMtype1_S_Cep9333ORF4827P-TRD2-CR2_like ABC_ATPase RVT-UG5 nitrilase PRK05367 PRK01202 Feature: gene Location: 10976-12127 bp Feature: domain Description: RMtype1_S_Aco12261I-TRD1-CR1_like Location: 11204-11462 bp Feature: domain Description: RMtype1_S_Aco12 2 61I-TRD1-CR1_like Location: 112 04-11462 bp Feature: domain Description: RMtype1_S_Cep9333ORF4827P-TRD2-CR2_like Location: 11588-12104 bp Feature: domain Description: RMtype1_S_Cep9333ORF482 7P-TRD2 -CR2 _like Location: 11588-12 104 bp Feature: gene Location: 12140-13891 bp Feature: domain Description: ABC_ATPase Location: 12227-13259 bp Feature: domain Description: ABC_ATPase Location: 12 2 2 7-132 59 bp Feature: gene Location: 13903-17106 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 14431-14929 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 14431-1492 9 bp Feature: domain Description: nitrilase Location: 16423-17017 bp Feature: domain Description: nitrilase Location: 1642 3-17017 bp Feature: gene Location: 17270-20161 bp Feature: domain Description: PRK05367 Location: 17294-20153 bp Feature: domain Description: PRK05367 Location: 172 94-2 0153 bp Feature: gene Location: 20313-20702 bp Feature: domain Description: PRK01202 Location: 20316-20694 bp Feature: domain Description: PRK012 02 Location: 2 0316-2 0694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Aco12261I-TRD1-CR1_like (cd17498), RMtype1_S_Cep9333ORF4827P-TRD2-CR2_like (cd17495), ABC_ATPase (pfam09818), RVT-UG5, nitrilase (cl11424), PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)