myRT

myRT report for GCA_000263115.1_Bact_frag_CL07T00C01_V1

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Seq: JH724207.1 Bacteroides fragilis CL07T00C01 genomic scaffold supercont1.2, whole genome shotgun sequence (696953 bp)
Overview 1 RT 1: 556702-560849 bp Neighborhood of RT #1 [556702, 560849] TipAS COG2369 LPD3 RVT-DGRs Feature: gene Location: 556702-557913 bp Ori: EIK37227.1 Feature: domain Description: TipAS Location: 556726-557029 bp Feature: domain Description: TipAS Location: 556726-557029 bp Feature: domain Description: COG2369 Location: 557149-557335 bp Feature: domain Description: COG2369 Location: 5571 49-557335 bp Feature: domain Description: LPD3 Location: 557554-557836 bp Feature: domain Description: LPD3 Location: 557554-557836 bp Feature: gene Location: 558011-558244 bp Feature: gene Location: 558620-559921 bp Ori: EIK37229.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 558833-559430 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 558833-559430 bp Feature: gene Location: 559918-560403 bp Feature: gene Location: 560664-560849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798), RVT-DGRs

Seq: JH724206.1 Bacteroides fragilis CL07T00C01 genomic scaffold supercont1.1, whole genome shotgun sequence (3868655 bp)
Overview 1 RT 1: 834867-839289 bp 2 RT 2: 1917656-1921036 bp 3 RT 3: 2076662-2085626 bp Neighborhood of RT #1 [834867, 839289] RVT-DGRs Neighborhood of RT #2 [1917656, 1921128] COG3943 RVT-Retrons HTH_17 Neighborhood of RT #3 [2076662, 2085628] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 834867-835214 bp Feature: gene Location: 835399-835575 bp Feature: gene Location: 835595-836410 bp Ori: EIK40056.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 835928-836252 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83592 8-8362 52 bp Feature: gene Location: 836927-838246 bp Feature: gene Location: 838267-839289 bp Feature: gene Location: 1917656-1918021 bp Ori: EIK38221.1 Feature: domain Description: COG3943 Location: 1917695-1917953 bp Feature: domain Description: COG3943 Location: 1917695-1917953 bp Feature: gene Location: 1918287-1919168 bp Feature: gene Location: 1919199-1920056 bp Ori: EIK38223.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1919361-1919886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1919361-1919886 bp Feature: gene Location: 1920082-1920297 bp Feature: gene Location: 1920763-1921128 bp Ori: EIK38225.1 Feature: domain Description: HTH_17 Location: 1920898-1921036 bp Feature: domain Description: HTH_17 Location: 192 0898-192 1036 bp Feature: gene Location: 2076662-2077576 bp Ori: EIK38354.1 Feature: domain Description: RNase_Z Location: 2076677-2077568 bp Feature: domain Description: RNase_Z Location: 2 076677-2 077568 bp Feature: gene Location: 2077726-2079519 bp Ori: EIK38355.1 Feature: domain Description: rpsA Location: 2077804-2079412 bp Feature: domain Description: rpsA Location: 2 077804-2 079412 bp Feature: gene Location: 2079661-2080773 bp Ori: EIK38356.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2079976-2080525 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 079976-2 08052 5 bp Feature: gene Location: 2080980-2083199 bp Feature: gene Location: 2083439-2085628 bp Ori: EIK38358.1 Feature: domain Description: GlnA3 Location: 2083514-2085626 bp Feature: domain Description: GlnA3 Location: 2 083514-2 08562 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, COG3943 (Uncharacterized conserved protein ), RVT-Retrons, HTH_17 (pfam12728), RNase_Z (TIGR02651), rpsA (TIGR00717), GlnA3 (COG3968)