myRT

myRT report for GCA_000263715.2_ASM26371v2

Download annotations/find similar RTs

Seq: CM001514.1 Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence (6297495 bp)
Overview 1 RT 1: 6655-14775 bp 2 RT 2: 4577885-4585007 bp Neighborhood of RT #1 [6655, 14775] SIR2_2 Piwi_piwi-like_ProArk RVT-UG1 Neighborhood of RT #2 [4577885, 4585007] DEXDc HTH_23 SR_Res_par HTH_7 RVT-Retrons Trypsin_2 Feature: gene Location: 6655-8517 bp Ori: EIK72129.1 Feature: domain Description: SIR2_2 Location: 7072-7459 bp Feature: domain Description: SIR2_2 Location: 7072-7459 bp Feature: gene Location: 8517-9962 bp Ori: EIK71338.1 Feature: domain Description: Piwi_piwi-like_ProArk Location: 8577-9918 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 8577-991 8 bp Feature: gene Location: 10051-13983 bp Ori: EIK71540.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 10756-11242 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 0756-1 1 242 bp Feature: gene Location: 14215-14517 bp Feature: gene Location: 14590-14775 bp Feature: gene Location: 4577885-4579333 bp Ori: EIK71287.1 Feature: domain Description: DEXDc Location: 4577921-4578245 bp Feature: domain Description: DEXDc Location: 4577921 -4578245 bp Feature: domain Description: HTH_23 Location: 4579214-4579316 bp Feature: domain Description: HTH_23 Location: 457921 4-457931 6 bp Feature: gene Location: 4581154-4581774 bp Ori: EIK73690.1 Feature: domain Description: SR_Res_par Location: 4581169-4581592 bp Feature: domain Description: SR_Res_par Location: 4581 1 69-4581 592 bp Feature: domain Description: HTH_7 Location: 4581658-4581763 bp Feature: domain Description: HTH_7 Location: 4581 658-4581 763 bp Feature: gene Location: 4582142-4583872 bp Ori: EIK71687.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4582295-4582916 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4582295-458291 6 bp Feature: domain Description: Trypsin_2 Location: 4583291-4583765 bp Feature: domain Description: Trypsin_2 Location: 4583291 -4583765 bp Feature: gene Location: 4584253-4584600 bp Feature: gene Location: 4584603-4585007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), Piwi_piwi-like_ProArk (cd04659), RVT-UG1, DEXDc (smart00487), HTH_23 (pfam13384), SR_Res_par (cd03767), HTH_7 (pfam02796), RVT-Retrons, Trypsin_2 (pfam13365)