myRT

myRT report for GCA_000264055.1_Flav123_1.0

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Seq: AJXL01000030.1 Flavobacterium sp. ACAM 123 ACAM123_contig00030, whole genome shotgun sequence (38512 bp)
Overview 1 RT 1: 18770-24579 bp Neighborhood of RT #1 [18770, 24579] TPR TPR_1 TPR TPR RVT-GII GIIM AAA_13 AAA_13 Feature: gene Location: 18770-19909 bp Feature: domain Description: TPR Location: 18881-19115 bp Feature: domain Description: TPR Location: 1 8881 -1 91 1 5 bp Feature: domain Description: TPR_1 Location: 19136-19220 bp Feature: domain Description: TPR_1 Location: 1 91 36-1 9220 bp Feature: domain Description: TPR Location: 19253-19313 bp Feature: domain Description: TPR Location: 1 9253-1 931 3 bp Feature: domain Description: TPR Location: 19346-19520 bp Feature: domain Description: TPR Location: 1 9346-1 9520 bp Feature: gene Location: 19925-20068 bp Feature: gene Location: 20605-21900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20800-21415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20800-21 41 5 bp Feature: domain Description: GIIM Note: maturase Location: 21487-21700 bp Feature: domain Description: GIIM Note: maturase Location: 21 487-21 700 bp Feature: gene Location: 21964-24318 bp Feature: domain Description: AAA_13 Location: 22048-22222 bp Feature: domain Description: AAA_1 3 Location: 22048-22222 bp Feature: domain Description: AAA_13 Location: 22849-23818 bp Feature: domain Description: AAA_1 3 Location: 22849-2381 8 bp Feature: gene Location: 24328-24579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_1 (pfam00515), RVT-GII, GIIM (pfam08388), AAA_13 (pfam13166)

Seq: AJXL01000131.1 Flavobacterium sp. ACAM 123 ACAM123_contig00131, whole genome shotgun sequence (8658 bp)
Overview 1 RT 1: 104-6077 bp Neighborhood of RT #1 [104, 6265] M20_pepD RVT-GII GIIM Y2_Tnp Feature: gene Location: 104-1567 bp Feature: domain Description: M20_pepD Location: 134-1556 bp Feature: domain Description: M2 0_pepD Location: 134-1556 bp Feature: gene Location: 1861-2709 bp Feature: gene Location: 2792-4087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2987-3602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 987-3602 bp Feature: domain Description: GIIM Note: maturase Location: 3674-3887 bp Feature: domain Description: GIIM Note: maturase Location: 3674-3887 bp Feature: gene Location: 4849-5241 bp Feature: gene Location: 5486-6265 bp Feature: domain Description: Y2_Tnp Location: 5627-6077 bp Feature: domain Description: Y2 _Tnp Location: 562 7-6077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M20_pepD (cd03890), RVT-GII, GIIM (pfam08388), Y2_Tnp (pfam04986)