myRT

myRT report for GCA_000264095.1_ASM26409v1

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Seq: AJWO01000081.1 Escherichia coli KD1 contig00105, whole genome shotgun sequence (13951 bp)
Overview 1 RT 1: 1-4581 bp Neighborhood of RT #1 [1, 4652] YhhI YhhI RVT-GII GIIM WcaA Feature: gene Location: 1-506 bp Ori: EIL48703.1 Feature: domain Description: YhhI Location: 4-304 bp Feature: domain Description: YhhI Location: 4-304 bp Feature: domain Description: YhhI Location: 361-502 bp Feature: domain Description: YhhI Location: 361 -502 bp Feature: gene Location: 776-2125 bp Ori: EIL48704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 052-1 736 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2033 bp Feature: domain Description: GIIM Note: maturase Location: 1 820-2033 bp Feature: gene Location: 2660-3865 bp Feature: gene Location: 3870-4652 bp Ori: EIL48706.1 Feature: domain Description: WcaA Location: 3891-4581 bp Feature: domain Description: WcaA Location: 3891 -4581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), WcaA (TIGR04017)

Seq: AJWO01000024.1 Escherichia coli KD1 contig00032, whole genome shotgun sequence (66934 bp)
Overview 1 RT 1: 1-3731 bp Neighborhood of RT #1 [1, 3784] RVT-UG17 SLATT_5 PRK09692 Feature: gene Location: 1-105 bp Feature: gene Location: 343-1752 bp Ori: EIL53613.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 580-1192 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 580-1192 bp Feature: gene Location: 1851-2588 bp Ori: EIL53614.1 Feature: domain Description: SLATT_5 Location: 1950-2556 bp Feature: domain Description: SLATT_5 Location: 1950-2 556 bp Feature: gene Location: 2585-3784 bp Ori: EIL53615.1 Feature: domain Description: PRK09692 Location: 2594-3731 bp Feature: domain Description: PRK09692 Location: 2 594-3731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)