myRT

myRT report for GCA_000264135.1_ASM26413v1

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Seq: AJWS01000077.1 Escherichia coli 576-1 contig00089, whole genome shotgun sequence (23564 bp)
Overview 1 RT 1: 9895-17123 bp Neighborhood of RT #1 [9895, 17299] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 9895-10914 bp Ori: EIL76403.1 Feature: domain Description: DUF4917 Location: 9955-10879 bp Feature: domain Description: DUF491 7 Location: 9955-1 0879 bp Feature: gene Location: 12313-14559 bp Ori: EIL76404.1 Feature: domain Description: AAA_15 Location: 12316-13324 bp Feature: domain Description: AAA_1 5 Location: 1 231 6-1 3324 bp Feature: gene Location: 14674-15774 bp Ori: EIL76405.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14857-15385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4857-1 5385 bp Feature: gene Location: 16324-16410 bp Feature: gene Location: 16430-17299 bp Ori: EIL76407.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 16952-17123 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 6952-1 71 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: AJWS01000468.1 Escherichia coli 576-1 contig00524, whole genome shotgun sequence (1931 bp)
Overview 1 RT 1: 119-1283 bp Neighborhood of RT #1 [119, 1369] RVT-GII GIIM Feature: gene Location: 119-1369 bp Ori: EIL58966.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 3-980 bp Feature: domain Description: GIIM Note: maturase Location: 1061-1283 bp Feature: domain Description: GIIM Note: maturase Location: 1061-12 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJWS01000165.1 Escherichia coli 576-1 contig00184, whole genome shotgun sequence (1662 bp)
Overview 1 RT 1: 1-1626 bp Neighborhood of RT #1 [1, 1662] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1197 bp Ori: EIL72173.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-679 bp Feature: domain Description: GIIM Note: maturase Location: 754-952 bp Feature: domain Description: GIIM Note: maturase Location: 754-952 bp Feature: gene Location: 1314-1662 bp Ori: EIL72174.1 Feature: domain Description: PHA02517 Location: 1317-1626 bp Feature: domain Description: PHA02517 Location: 13 17-1626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AJWS01000164.1 Escherichia coli 576-1 contig00183, whole genome shotgun sequence (12154 bp)
Overview 1 RT 1: 1-1722 bp Neighborhood of RT #1 [1, 1724] RVT-GII PHA02517 InsE Feature: gene Location: 1-327 bp Ori: EIL72181.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274 -328 bp Feature: gene Location: 919-1401 bp Ori: EIL72182.1 Feature: domain Description: PHA02517 Location: 982-1336 bp Feature: domain Description: PHA02517 Location: 982-1336 bp Feature: gene Location: 1398-1724 bp Ori: EIL72183.1 Feature: domain Description: InsE Location: 1401-1722 bp Feature: domain Description: InsE Location: 14 01-1722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)