myRT

myRT report for GCA_000264805.1_ASM26480v1

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Seq: AFJG01000135.1 Edwardsiella tarda ATCC 15947 = NBRC 105688 strain ATCC 15947 NODE_159, whole genome shotgun sequence (8317 bp)
Overview 1 RT 1: 473-6946 bp Neighborhood of RT #1 [473, 6960] RVT-GII Na_sulph_symp HTH_Tnp_1 RVT-GII RVT-GII PHA02517 Feature: gene Location: 473-760 bp Feature: gene Location: 1080-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092-1305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 092-1 305 bp Feature: gene Location: 1457-2878 bp Feature: domain Description: Na_sulph_symp Location: 1475-2873 bp Feature: domain Description: Na_sulph_symp Location: 1 475-2873 bp Feature: gene Location: 3093-3353 bp Feature: gene Location: 4141-4347 bp Feature: domain Description: HTH_Tnp_1 Location: 4147-4318 bp Feature: domain Description: HTH_Tnp_1 Location: 41 47-431 8 bp Feature: gene Location: 4493-4792 bp Feature: gene Location: 5606-5824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5714-5792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 4-5792 bp Feature: gene Location: 5911-6075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5917-6061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 7-6061 bp Feature: gene Location: 6316-6486 bp Feature: gene Location: 6712-6960 bp Feature: domain Description: PHA02517 Location: 6718-6946 bp Feature: domain Description: PHA0251 7 Location: 671 8-6946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Na_sulph_symp (pfam00939), HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AFJG01000219.1 Edwardsiella tarda ATCC 15947 = NBRC 105688 strain ATCC 15947 NODE_302, whole genome shotgun sequence (1770 bp)
Overview 1 RT 1: 335-1260 bp Neighborhood of RT #1 [335, 1769] Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-UG17 Feature: gene Location: 335-607 bp Feature: domain Description: Zn_Tnp_IS1 Location: 338-440 bp Feature: domain Description: Zn_Tnp_IS1 Location: 338-440 bp Feature: domain Description: HTH_Tnp_IS1 Location: 461-596 bp Feature: domain Description: HTH_Tnp_IS1 Location: 461-596 bp Feature: gene Location: 812-967 bp Feature: gene Location: 1023-1769 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1026-1260 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 102 6-12 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-UG17