myRT

myRT report for GCA_000266985.1_ASM26698v1

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Seq: JH692065.1 Burkholderia thailandensis MSMB43 genomic scaffold Scaffold5, whole genome shotgun sequence (790642 bp)
Overview 1 RT 1: 109927-115391 bp Neighborhood of RT #1 [109927, 115391] DUF1566 Avd_like RVT-DGRs Dcm Dcm Feature: gene Location: 109927-110391 bp Ori: EIP85878.1 Feature: domain Description: DUF1566 Location: 110188-110368 bp Feature: domain Description: DUF1 566 Location: 1 1 01 88-1 1 0368 bp Feature: gene Location: 110463-110780 bp Ori: EIP85879.1 Feature: domain Description: Avd_like Location: 110469-110739 bp Feature: domain Description: Avd_like Location: 1 1 0469-1 1 0739 bp Feature: gene Location: 111103-112113 bp Ori: EIP85880.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 111196-111883 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 1 1 96-1 1 1 883 bp Feature: gene Location: 112110-113873 bp Ori: EIP85881.1 Feature: domain Description: Dcm Location: 112161-112608 bp Feature: domain Description: Dcm Location: 1 1 21 61 -1 1 2608 bp Feature: domain Description: Dcm Location: 112704-113829 bp Feature: domain Description: Dcm Location: 1 1 2704-1 1 3829 bp Feature: gene Location: 113892-115391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: JH692080.1 Burkholderia thailandensis MSMB43 genomic scaffold Scaffold20, whole genome shotgun sequence (4957 bp)
Overview 1 RT 1: 773-4158 bp Neighborhood of RT #1 [773, 4538] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 773-1117 bp Feature: gene Location: 1360-2913 bp Ori: EIP84357.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1462-1675 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1462 -1675 bp Feature: domain Description: zf-IS66 Location: 1702-1822 bp Feature: domain Description: zf-IS66 Location: 1702 -182 2 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1873-2728 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1873-2 72 8 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2752-2860 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 752 -2 860 bp Feature: gene Location: 3057-4538 bp Ori: EIP84358.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3468-4158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3468-4158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: JH692063.1 Burkholderia thailandensis MSMB43 genomic scaffold Scaffold3, whole genome shotgun sequence (959023 bp)
Overview 1 RT 1: 863050-868569 bp Neighborhood of RT #1 [863050, 868569] IS285 RVT-UG7 Feature: gene Location: 863050-863508 bp Ori: EIP87961.1 Feature: domain Description: IS285 Location: 863056-863407 bp Feature: domain Description: IS285 Location: 863 056-863 407 bp Feature: gene Location: 864083-865798 bp Ori: EIP87962.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 864584-864980 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 864584-864980 bp Feature: gene Location: 865990-868569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-UG7