myRT

myRT report for GCA_000268105.1_ASM26810v1

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Seq: AKNG01000063.1 Shigella dysenteriae 225-75 gss22575.contig.62, whole genome shotgun sequence (20107 bp)
Overview 1 RT 1: 14142-17709 bp Neighborhood of RT #1 [14142, 17723] COG3547 DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 PHA02517 Feature: gene Location: 14142-14627 bp Feature: domain Description: COG3547 Location: 14160-14613 bp Feature: domain Description: COG3547 Location: 1 41 60-1 461 3 bp Feature: gene Location: 14654-14797 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 14663-14774 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 4663-1 4774 bp Feature: gene Location: 14916-16043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15012-15666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 2-1 5666 bp Feature: domain Description: GIIM Note: maturase Location: 15744-15966 bp Feature: domain Description: GIIM Note: maturase Location: 1 5744-1 5966 bp Feature: gene Location: 16611-16742 bp Feature: domain Description: DDE_Tnp_IS66 Location: 16623-16716 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 6623-1 671 6 bp Feature: gene Location: 16824-17723 bp Feature: domain Description: PHA02517 Location: 16884-17709 bp Feature: domain Description: PHA0251 7 Location: 1 6884-1 7709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PHA02517 (putative transposase OrfB; Reviewed)