myRT

myRT report for GCA_000268145.1_ASM26814v1

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Seq: AKNA01000030.1 Shigella boydii 965-58 gss96558.contig.29, whole genome shotgun sequence (21652 bp)
Overview 1 RT 1: 16062-20601 bp Neighborhood of RT #1 [16062, 20603] sopB_N ParB COG3547 RVT-GII GIIM DDE_Tnp_IS66 PHA02517 Feature: gene Location: 16062-17042 bp Feature: domain Description: sopB_N Location: 16239-16434 bp Feature: domain Description: sopB_N Location: 1 6239-1 6434 bp Feature: domain Description: ParB Location: 16647-17022 bp Feature: domain Description: ParB Location: 1 6647-1 7022 bp Feature: gene Location: 17298-17783 bp Feature: domain Description: COG3547 Location: 17316-17769 bp Feature: domain Description: COG3547 Location: 1 731 6-1 7769 bp Feature: gene Location: 18072-19199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18168-18822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 68-1 8822 bp Feature: domain Description: GIIM Note: maturase Location: 18900-19122 bp Feature: domain Description: GIIM Note: maturase Location: 1 8900-1 91 22 bp Feature: gene Location: 19767-19904 bp Feature: domain Description: DDE_Tnp_IS66 Location: 19779-19878 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 9779-1 9878 bp Feature: gene Location: 19992-20603 bp Feature: domain Description: PHA02517 Location: 19995-20601 bp Feature: domain Description: PHA0251 7 Location: 1 9995-20601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sopB_N (cd16394), ParB (smart00470), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PHA02517 (putative transposase OrfB; Reviewed)