myRT

myRT report for GCA_000268245.1_ASM26824v1

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Seq: AKMX01000079.1 Shigella flexneri K-1770 gssK1770.contig.78, whole genome shotgun sequence (19756 bp)
Overview 1 RT 1: 16794-19756 bp Neighborhood of RT #1 [16794, 19756] COG3547 DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 16794-17279 bp Feature: domain Description: COG3547 Location: 16812-17265 bp Feature: domain Description: COG3547 Location: 1 681 2-1 7265 bp Feature: gene Location: 17306-17449 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17315-17426 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 731 5-1 7426 bp Feature: gene Location: 17568-18695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17664-18318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7664-1 831 8 bp Feature: domain Description: GIIM Note: maturase Location: 18396-18618 bp Feature: domain Description: GIIM Note: maturase Location: 1 8396-1 861 8 bp Feature: gene Location: 19263-19394 bp Feature: domain Description: DDE_Tnp_IS66 Location: 19275-19368 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 9275-1 9368 bp Feature: gene Location: 19488-19756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: AKMX01000080.1 Shigella flexneri K-1770 gssK1770.contig.79, whole genome shotgun sequence (14616 bp)
Overview 1 RT 1: 9587-13605 bp Neighborhood of RT #1 [9587, 13607] Inovirus_Gp2 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9587-9766 bp Feature: domain Description: Inovirus_Gp2 Location: 9593-9758 bp Feature: domain Description: Inovirus_Gp2 Location: 9593-9758 bp Feature: gene Location: 10175-10621 bp Feature: domain Description: PHA02517 Location: 10178-10619 bp Feature: domain Description: PHA02 517 Location: 10178-10619 bp Feature: gene Location: 10738-12246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10996-11728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10996-1172 8 bp Feature: domain Description: GIIM Note: maturase Location: 11803-12001 bp Feature: domain Description: GIIM Note: maturase Location: 11803-12 001 bp Feature: gene Location: 12853-13332 bp Feature: domain Description: PHA02517 Location: 12913-13267 bp Feature: domain Description: PHA02 517 Location: 12 913-132 67 bp Feature: gene Location: 13332-13607 bp Feature: domain Description: InsE Location: 13383-13605 bp Feature: domain Description: InsE Location: 13383-13605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Inovirus_Gp2 (pfam11726)