myRT

myRT report for GCA_000269525.1_PB_Bact_frag_CL05T00C42_V1

Download annotations/find similar RTs

Seq: AKBY01000001.1 Bacteroides fragilis CL05T00C42 cont1.1, whole genome shotgun sequence (1406492 bp)
Overview 1 RT 1: 1292577-1301542 bp Neighborhood of RT #1 [1292577, 1301544] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 1292577-1293491 bp Feature: domain Description: RNase_Z Location: 1292592-1293483 bp Feature: domain Description: RNase_Z Location: 1 292592-1 293483 bp Feature: gene Location: 1293642-1295435 bp Feature: domain Description: rpsA Location: 1293720-1295328 bp Feature: domain Description: rpsA Location: 1 293720-1 295328 bp Feature: gene Location: 1295577-1296689 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1295892-1296441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 295892-1 296441 bp Feature: gene Location: 1296896-1299115 bp Feature: gene Location: 1299355-1301544 bp Feature: domain Description: GlnA3 Location: 1299430-1301542 bp Feature: domain Description: GlnA3 Location: 1 299430-1 301 542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)

Seq: AKBY01000004.1 Bacteroides fragilis CL05T00C42 cont1.4, whole genome shotgun sequence (452504 bp)
Overview 1 RT 1: 1262-8822 bp Neighborhood of RT #1 [1262, 8905] COG4646 RVT_N RVT-GII GIIM ACT_CBS PRK13351 PRK13351 Feature: gene Location: 1262-2728 bp Feature: domain Description: COG4646 Location: 1268-2345 bp Feature: domain Description: COG4646 Location: 12 68-2 345 bp Feature: gene Location: 2920-3048 bp Feature: gene Location: 3388-5055 bp Feature: RT Description: RVT_N Location: 3442-3685 bp Feature: RT Description: RVT_N Location: 3442 -3685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3730-4378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3730-4378 bp Feature: domain Description: GIIM Note: maturase Location: 4432-4663 bp Feature: domain Description: GIIM Note: maturase Location: 4432 -4663 bp Feature: gene Location: 5006-6322 bp Feature: domain Description: ACT_CBS Location: 5540-5720 bp Feature: domain Description: ACT_CBS Location: 5540-572 0 bp Feature: gene Location: 6932-8905 bp Feature: domain Description: PRK13351 Location: 6980-7451 bp Feature: domain Description: PRK13351 Location: 6980-7451 bp Feature: domain Description: PRK13351 Location: 7496-8822 bp Feature: domain Description: PRK13351 Location: 7496-882 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ACT_CBS (cd04884), PRK13351 (elongation factor G-like protein)